Gossypium arboreum (tree cotton): 108457203
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Entry
108457203 CDS
T05776
Name
(RefSeq) CLIP-associated protein-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108457203
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gab04812
]
108457203
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108457203
Cytoskeleton proteins [BR:
gab04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
108457203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT_EZ
HEAT
Vac14_Fab1_bd
MMS19_C
RIX1
RRP12_HEAT
INTS1_R4
UTP20
V-ATPase_H_N
DUF1690
Motif
Other DBs
NCBI-GeneID:
108457203
NCBI-ProteinID:
XP_017611608
LinkDB
All DBs
Position
9:complement(52604143..52616770)
Genome browser
AA seq
1386 aa
AA seq
DB search
MEKLLELARSKDPKDRATGAELLHSLLQSSTGPLSSSDVESLVSTCIHLLNDPSNLNASL
GALQCLASAAVLSADNLKLHFDGVLPAIVECLGDNKQPLRDAARGLLLTFMEVSSPTIIV
DKVGPITWAHNSLRVREEFMRTVTSAITVFTSMESMKAILPPILQMLNDSIQSIREGATL
CIEEMYMQFGPEFLAELQRNNLPSSVLGDINIRLQKIEPKVFSFNRHVSSASSDQVDSAK
GNQAESNPKTKDSFKDISVSGGEIDFTDKPIVPVTLNSEKELIREMEKIACMLVAENDWS
VRIAAMQRVEALVIGGATSYPCFHALLKQLVAPLCTQLSDRRSSIVKQACHLLCFLSKEL
LGDFEACSEMFIPVLFKLVVITVLIIAESADTCIKTMLCNCKVSRVLPQIVNHAKHDRNA
VLRARCCEYSLLMLEYWAYAPEIQKSADLYEDLIKCCIADAMSEVRSNARRCYRLFKKTW
PERSQQLFLSFDSVVQRMINDEDGTTHRRHPSPSVRVKDVRKSHKAFQAPTSTTLPGPAT
SAVTTVDRNRAVPGGIPLSAGPFLSEVKSHRNGTERSFENMPNTNKQRAPAIENALAGLI
IPEKLSYQKKRSASFDLGVDPPPACGLSFPPIVAASAVTANAIFTDSTASTVKACLSSKS
GKQACGFMEEHSDDRFARKSVDKHIDKQHVDTSSKDANFRDFQGNIIPNFQRPLLRKNIS
TRVSGNSRSFLDDNQILLSEMSNYVDGPASLQEALTEGLSPNSNWSARVAAFNYVRSLLQ
QDQKGVQEVAQNFEKVMKLFFQHLDDPHHKVAHAALSALADIISACRKPFESYLDRILHH
VFSRLIDPKESVRQLSVMNLEVVSKAYGIDSLLPALLRALDEQRSPKAKLAVIEYAISSF
KKNAMNSDGAANSGILKLWIAKLIPLIYDKNTKLKEAAISCIVSIHTHYDSVGVINYIMC
MSAEEQNSLRRILRQQTPRIEMDLMNFLQNKRERPRPRNSHEPSDVGLSPDGEYTGALKK
AYYFGRYSSGSNDIDNSKKLFSMQEPMQVLEPIAQKVSSEAQKNLPQNLEGGCNNAFTCT
TTGADHPDGVDCENSMDDWPSTCFDMNTMTISNHFGISNSTIGIDTFVDVNNSNENSSNT
KTCSSLKSRIIIPQILHQISNNKESATVRQQALQQLIEASMDTNLSLWTKHFNQILKVII
EVLDAPDSSTQELTLQLVADMVNKQKDAMEDSIEIVIEKLLHIAKDAVSKVSIEAENCLS
MILSEYDPFKCLSVIVALLIHEDEKTLIFCIKTLTKLVRRLSQEELLAQLPSFLPVLFCA
FSNQSAEVRKTVVFCLVDIYVMLGKAFRPYLQDLNGTQLRLVTLYANRISQARTGTCVEA
INLPAV
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggagaaactccttgaactagcacgttccaaggacccaaaggaccgagcaacaggggct
gagcttcttcattctcttctccagtcttccactggacccttgtcttcttccgacgttgaa
tctcttgtttcaacttgtattcaccttctcaatgacccatctaacttaaacgcctctttg
ggagctctccagtgtctagcatctgctgccgtgctctcagctgacaacttgaagctgcat
tttgatggggttttacctgcaattgtggagtgtttaggggataataagcagcctttacgt
gatgcagctagagggctgttgttgactttcatggaggtttcttctccaactattattgta
gataaagttgggccgataacctgggcgcataacagcctgagagttcgtgaagagtttatg
aggactgtcacttctgctatcactgtttttacgtcgatggagtccatgaaggctattctt
cctccgattttacagatgttgaatgactcaattcagagcattagagaaggtgctacattg
tgcattgaggaaatgtacatgcagtttgggcctgaatttcttgctgaactccagcgaaac
aatcttccttcatcagtgttaggagatattaatatcagattgcagaagatagaaccgaag
gttttcagtttcaatagacacgtgtcatctgcttcttctgatcaagttgactcagccaag
gggaaccaagcagagagcaatcctaagacaaaggattcttttaaagatatatctgtttct
ggaggagagattgactttacagacaaacccatagttccagttactttaaactctgaaaag
gagctaataagagaaatggagaagattgcgtgtatgcttgtagcggaaaatgattggtct
gttcgaatagctgctatgcagcgagttgaagctcttgtcattggaggtgccaccagttat
ccatgttttcatgctctcttgaagcaacttgttgcacctctttgcacacagttgtccgac
cgaaggtctagcatcgtaaagcaggcctgtcatctcttatgtttcttgtcaaaagagctg
ttgggggattttgaagcttgttcggaaatgttcatcccggtccttttcaagctggttgtg
attacggttcttataatagctgaatccgcagacacctgcatcaaaacaatgctgtgtaac
tgcaaagtttcccgtgtacttcctcaaatagttaaccatgcaaaacatgaccgtaatgca
gtactccgtgctagatgctgtgagtactctcttctgatgctggagtactgggcctatgcg
ccagaaatacagaaatctgcagatctttacgaggatcttataaaatgctgtatagctgat
gcaatgagtgaggtacggtcaaatgctcgtcgttgctacagactgttcaagaaaacttgg
ccagagcgttctcagcaactatttctgtcctttgattcagtcgtccaaaggatgataaac
gatgaagatgggaccacacatagacgccatccttctccttcagttcgagtaaaggatgtc
cgtaaatcccataaggcttttcaagcacctacttctacaactttacctggacctgcaact
tcagcagttaccacagtggatcggaatagggctgtaccaggaggcattcctctatctgct
ggtccatttctctctgaagtaaagtcacatcgaaatggtactgaaagaagttttgaaaac
atgccaaatacaaacaaacagcgggctccggctatcgaaaatgcgcttgctggtttaatt
atacctgaaaaactcagttatcaaaagaagaggtcagctagctttgatttaggagttgac
cctcctccagcttgtggcctctcatttccccctattgtcgctgcttcagctgttactgca
aatgctatttttactgactcaactgcatcgaccgttaaagcttgtttgtcatcgaaatcg
gggaagcaagcttgtggttttatggaagagcattctgatgataggtttgcccggaaatcc
gtagataagcatattgacaaacagcatgtagatacttcttcaaaagatgccaattttagg
gacttccaaggtaatattattccaaacttccagaggccgcttttaagaaagaacatttca
actcgagtttctggaaacagtagaagttttctagatgacaatcagatactacttagtgaa
atgtcgaactatgtggatggcccagcatcactccaggaggctctgacagagggtctcagt
ccaaattctaattggtctgctagagttgcggcttttaattatgtccgaagtctgctgcag
caggaccaaaaaggagtccaagaagttgcacagaattttgagaaagtcatgaagttgttt
ttccaacacttggatgatccgcaccataaagttgcacacgccgctctctcggcccttgca
gatataatttcagcatgtagaaaaccttttgaaagttacttggatcgaatcttacaccat
gtgttttcaaggttaattgatccgaaggaatcagttcggcagctttctgtaatgaatctg
gaagttgtaagcaaagcctatggcatagattctcttttaccagctttgctccgtgcatta
gatgaacagagatcaccgaaggcaaaactggctgttatagaatacgctatcagttctttc
aagaagaatgctatgaattcagacggtgctgctaatagcggcatcctaaagctgtggatt
gctaaattaatacctttgatctatgataaaaacacaaaactaaaagaagcagccatctcc
tgcattgtatctatacatactcactatgactccgttggtgttataaactacatcatgtgt
atgtcagctgaagagcaaaattctctaaggcgaattcttaggcagcaaactcctcgaatt
gaaatggatcttatgaacttcttgcagaacaagagagaaagaccccgtcctagaaacagt
cacgagccatctgatgtcggactttctcctgatggtgaatatactggtgcattgaagaag
gcttactattttggaagatattcttcaggttcgaatgatatcgataacagcaagaagttg
ttctccatgcaagaaccgatgcaagttttagaacctattgctcaaaaagtatcaagtgaa
gctcagaaaaatttacctcagaatctcgaaggcggctgtaataatgcttttacttgcact
actactggtgctgaccatcctgatggtgttgattgtgagaattcaatggacgactggcct
tcgacatgttttgacatgaatacgatgacaatctctaatcattttggaataagcaattcc
actattggtattgacacttttgttgatgtcaataatagtaatgagaattccagcaatacc
aagacttgctcttctctaaaatcgcgtatcatcattcctcaaattcttcaccagatttct
aacaataaggagagtgcaaccgttagacagcaagcacttcagcagctcatagaagcttcc
atggatacaaacctttcgttatggacaaagcatttcaaccagattctgaaagttatcatt
gaggtgttggatgctcctgattcttcaacccaggaattgaccctgcagttagtagctgac
atggtgaacaaacagaaagatgcgatggaagattctattgaaattgtaattgaaaagtta
cttcatattgctaaggatgcagtttccaaggtttcaattgaagcagagaactgcttatca
atgattttatcagaatatgaccctttcaaatgtctaagtgttattgtagcccttttaatc
catgaagatgagaaaactcttattttttgcatcaagacattaacaaagcttgtccgtcga
ctttctcaagaggaacttctggctcagctaccttcatttttaccagttcttttttgcgca
ttcagcaatcaaagcgctgaagttcgcaagactgttgttttctgcttggtcgatatttac
gtcatgctcgggaaggcgttccggccatacttgcaggatcttaatgggacccagttgcgt
ctggtgactctttatgccaacagaatttctcaagccagaactggaacttgtgttgaagct
attaatttgccggcggtctga
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integrated database retrieval system
