Gossypium arboreum (tree cotton): 108457210
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Entry
108457210 CDS
T05776
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108457210
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gab01009
]
108457210
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108457210
03036 Chromosome and associated proteins [BR:
gab03036
]
108457210
Protein phosphatases and associated proteins [BR:
gab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108457210
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108457210
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108457210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
108457210
NCBI-ProteinID:
XP_017611623
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All DBs
Position
9:65938686..65946835
Genome browser
AA seq
514 aa
AA seq
DB search
MKGGDEEVATPAGPPQPLDWKFSQVFGERIAGEEIQEVDIISAIEFDKTGDHLATGDRGG
RVVLFERTDAKDHGLSRRDLERTDYPISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQTANSALFLLSTNDKTIKFWKVQEKKIKKISKIIADPSKAVGNGNVASSSNSNSPK
PFPTNGVSPDRSCNHLGNDLSFPPGGLPSLCLPVVVTSQETNLVARCRRVYGHAHDYHIN
SISNNSDGETFISADDLRINLWNLEISNQSFNIVDLKPANMEDLTEVITSAEFHPAHCNM
LAYSSSKGSIRLIDLRQSALCDSHAKLFEESEAPGSRSFFTEIIASISDIKFAKDGRYIL
SRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGS
YSNLFRVFGCAPGSTEATTLEATKNPMRRQVQTPSRPSRSLNSITRVVRQAETLGVDANG
NSLDFTTKLLHLAWHPTENLIACVAANSLYMYYA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaggcgatgaggaggtcgcaactccggctggcccgccacagccgttggattgg
aaattttctcaggtatttggtgaacgaatcgctggagaagaaattcaagaagttgatatt
atttccgcaattgaattcgataaaactggggatcatcttgcaactggtgaccgtgggggc
cgtgtggttctttttgagaggacagatgcaaaggatcatggtctatcaagaagggatcta
gaaagaacggattatccaattagtcggcaccctgagttccgttacaagacagagttccag
agccatgagcctgagtttgactacctcaagagcttggaaatagaggaaaaaatcaacaaa
atcagatggtgccaaacagccaatagtgcactgtttctcctctccaccaatgataaaacc
atcaaattttggaaggtacaagaaaagaagatcaagaaaatttctaaaattattgctgac
ccttcgaaagctgttggaaatggaaatgttgctagttcaagtaattcaaatagcccaaaa
ccttttcctacaaatggagtctcccccgacagatcctgcaaccatttgggcaatgacctc
tctttcccaccaggaggccttccatcgctatgtttacctgtggtagtaacaagtcaggag
accaacctagtggcgagatgtcgaagagtatatggccatgctcatgattatcatatcaac
tctatttcaaataacagtgatggcgaaacttttatatcagctgatgatttgcgtataaat
ctttggaacctggaaattagcaatcaaagtttcaatattgttgatttaaagcctgcaaac
atggaggatctaactgaggttataacatcagcagagtttcaccctgcccactgtaatatg
ttggcatatagtagctcaaagggctcgattcgcctcattgatttgcggcaatcagctttg
tgtgattctcatgccaaattgtttgaagaatcagaggcacctggttctagatcgtttttt
acagagataatcgcctcaatatcagatattaaatttgccaaggatggaagatatattctc
agccgtgattacatgactcttaagttatgggacataaacatggattcgggtcccgttgca
acattccaggttcacgaatatttaagaccaaagttgtgtgatttgtatgaaaacgattca
atctttgacaaatttgagtgttgcctaagcggtgatggattgcgagttgcgacaggttcc
tacagcaatctattccgtgtatttggttgtgcccctggaagcactgaggcaacgactttg
gaagccaccaaaaatccaatgaggagacaagttcagacaccctcaaggccttccagatcc
ctaaacagcataacacgtgttgtacgacaagcagaaacccttggagttgatgcaaatgga
aactctcttgatttcacgacaaagttgctgcacttagcgtggcaccccaccgaaaacttg
atagcttgtgttgctgctaacagcttgtacatgtactatgcataa
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