Gossypium arboreum (tree cotton): 108457248
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Entry
108457248 CDS
T05776
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108457248
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gab01009
]
108457248
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108457248
03019 Messenger RNA biogenesis [BR:
gab03019
]
108457248
03041 Spliceosome [BR:
gab03041
]
108457248
Enzymes [BR:
gab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108457248
Protein phosphatases and associated proteins [BR:
gab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
108457248
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108457248
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108457248
Spliceosome [BR:
gab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108457248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
108457248
NCBI-ProteinID:
XP_017611696
UniProt:
A0A0B0NMZ2
LinkDB
All DBs
Position
9:87564104..87567094
Genome browser
AA seq
334 aa
AA seq
DB search
MDARVLDGIINRLLEVRGKPGKLVQLSESEIRQLCLVSKDIFSRQPVLLELEAPIKICGD
IHGQYSDLLRLFEIGGFPPHVNYLFLGDYVDRGKQSLETICLLLAYKVKYPEKVFLLRGN
HECASVNRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALVDEKIFCMHGGLSPELLSMD
QIRKIKRPTDVPDSGLLCDLLWSDPCKDILGWGPNDRGVSYVFGSDRVIDCLKRLDLDII
CRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAAAMLSVDESLTCSFQIIKAADKKPK
FGFGTLASTKSSITPTRIKEQWPEQEEEEGCHLM
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcgtgttcttgatggtataatcaataggttgcttgaagttagaggtaaacca
gggaagctagtccagctttctgagtctgaaataaggcagctttgtcttgtttctaaagat
atcttttccaggcagcctgttcttttagagcttgaagcacctattaagatttgcggagac
attcatggtcagtattctgatctcctgaggctattcgagattggtggtttccctcctcat
gtcaattacttattcttgggggattacgtagatcgtggaaaacaaagcctcgaaacgata
tgccttctccttgcatacaaagtcaaatatcccgaaaaagttttccttctaaggggcaac
cacgaatgtgcttcagtgaaccgcatctacggattttatgacgagtgcaaacgaagattc
aatgtccggctttggaaagtgttcactgattgttttaactgcctgcctgtggcagctctg
gttgatgaaaaaatattctgcatgcatggtggactttcaccagagctccttagcatggac
cagattagaaagataaagaggcctactgatgttccagactctggcttactgtgtgatcta
ctatggtctgatccttgtaaagacattctgggatggggtcctaatgatcggggagtttcc
tatgtgtttggttccgacagggtgatcgattgtctcaagaggctcgatcttgatatcata
tgtcgagcacaccaggtggttgaagatggatatgaattctttgctaacaggcaacttgta
accatattttcagcaccaaattactgcggcgagttcgacaatgctgctgccatgttgagc
gtggatgagtctttaacttgttctttccagataataaaggctgcagataagaaaccgaag
tttgggtttggaaccttagcttcaaccaagtcttccattactcctactagaatcaaggag
caatggccggagcaagaggaagaagaggggtgtcatttgatgtga
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