Gossypium arboreum (tree cotton): 108457292
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Entry
108457292 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6-like isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108457292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108457292
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108457292
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
HECT type E3
108457292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
108457292
NCBI-ProteinID:
XP_017611762
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All DBs
Position
9:complement(88804332..88813973)
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AA seq
1032 aa
AA seq
DB search
MFFSGDPTTRKRVDLGGRSSKERDRQKLLEQTRLERNRRLWLRQQNSAALKIQKYFRGRK
VVEVERAKVQEQFYKTYGKHCHHVDRHCFGPDSEFLRQLIFFVNAWNMNDFSVLVETCRL
IQHFVRESGDVVELFAGTDYLSNHSLVVYRLKRLSFACIQAIHHNRNQLKDQLLMTGEEP
SASTAILLQALVLILDPKLPWACKTVGYLLKRNVFSLFREVILTAKENINAKGSFGKVSA
LEHVLACMVSHVGQSPCICTNVDPQWSFSFQILTIPFLWKKFPYLKEVFASRSLTQYYTN
QMALCVQNHANVLPTDMLNEFPGYACILGNILETTGAALSQPDCSFEMALDLAAVTTYLL
EALPPIKSSSRESSTVGEDDMIIGDESVEIVLDDNLQQQITNAIDSCFLVQLTNVLFGGI
STAHGSHNEGPDDKEVAAVAAACAFLHVTFNTLPLERIMTVLAYRTELVPVLWNFMKRCH
QNQKWSSLPERFSYLLGDAPGWLLPLSVFCPVYKHMLMIVDNEEFYEQEKPLSLKDVRCL
IVILRQALWQILWVNPSAHPSSGKFISNTSGHKKHPVEAIQSRVGTVASELLSQLQDWNN
RRQFTPSSDFHADGVNDYFISQAVTEGTKAHDILKQAPFLIPFTSRVKIFTSQLASVRQR
QEAHGVFTRNRFRIRRDHILEDAYNQMSALSEEDLRGLIRVTFVNEFGVEEAGIDGGGIF
KDFMENITRAAFDVQYGLFKETADHLLYPNPGSGMIHEQHLQFFHFLGSLLAKAMFEGIL
VDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYKEDISELELYFVIVNNEYGE
QTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSTHFLRGFQQLMRKEWIDMFN
EHELQLLISGSLDSLDVDDLRQNTNYAGGYHGEHYVIDMFWEVLKSFSLENQKKFLKFVT
GCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPPYGSKEQLETKLL
YAINAEAGFDLS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctcgggtgatccgactactcggaaacgggttgatttgggcggtcggagctcc
aaagagagagataggcagaaacttcttgaacaaacgcgtttggaacgcaatcgccgtctt
tggttgcgccagcaaaattctgcagctctcaagattcagaaatacttcagagggagaaag
gtagtggaagttgaacgagccaaggtgcaagagcagttctacaaaacttatggaaagcac
tgccatcatgtagacaggcattgttttggtccagactcagagtttctccgccagctaatt
ttctttgtcaatgcatggaatatgaatgatttttctgttcttgttgagacttgccgatta
attcagcattttgttcgagaaagtggggatgtcgtggaactctttgcaggcacggactac
ttatccaatcattctttggttgtctacaggttgaagcgactctcatttgcttgcattcag
gctatacatcacaacagaaatcaattgaaagatcaactgttgatgacgggagaggagcct
agtgcatcaacagccatattgcttcaagcattggttttgatattagaccctaaactgcca
tgggcttgtaagacagttggttatctcttgaaaagaaatgtattctctctgtttagagaa
gttattttaactgcaaaggaaaacataaatgctaaaggttcttttgggaaagtatctgcg
ttagagcatgtgcttgcttgtatggtttctcatgttggtcagagtccatgtatttgcaca
aatgtggatccccagtggagtttctcattccaaattcttacaatccctttcttatggaaa
aaattcccatacttaaaagaggtttttgcttctcggagcttgacccaatactacactaat
cagatggctttgtgtgtgcaaaaccatgctaatgtacttcccactgatatgttgaatgag
tttcctggttatgcctgcattcttggtaatatattagaaacaacaggtgccgctttatct
cagcccgactgctcatttgaaatggccttagaccttgcagcagttacaacatacttattg
gaagctcttcctcctataaaatcttcaagcagagaaagttctacagttggggaggatgac
atgataattggtgatgaatcagtggaaattgttttggatgataatttgcaacagcagata
acaaatgctattgattcatgttttcttgtgcaattgactaatgtgttatttggagggatt
tccactgcccatggttcacataatgaaggcccagatgataaggaggtggcagctgttgca
gctgcgtgtgcttttttgcatgttacattcaatactttacctctagagagaatcatgact
gtactagcatatagaactgaacttgttccagtgctttggaattttatgaagcgatgtcat
caaaatcaaaagtggtcatccttgcctgagcgcttttcatatcttctgggagatgcacct
ggttggttgctacctctgtccgttttttgtccagtgtacaagcacatgcttatgatagtt
gataatgaggagttttatgagcaggagaagcctctgtctttgaaggatgtcagatgccta
attgtcattctgagacaggctttgtggcagatcctatgggtgaatccttcagctcacccc
agttctgggaaattcatctccaacacttctggtcataagaagcaccctgttgaagctatt
caaagtagggttggtactgtagcctctgagctgctatcccagttgcaagattggaataac
cggcggcagttcactccctctagtgacttccatgctgatggtgtaaatgactattttatt
tctcaggctgtaacggaaggcacaaaagcgcatgacatattgaagcaagcacctttcttg
attccattcactagcagagttaaaatattcacttcacaactagcctcagtcaggcagaga
caagaggctcatggtgtttttaccagaaaccggttcagaatacgaagggatcatattctg
gaagatgcgtataatcagatgagtgcattatccgaagaggatcttagaggactgattcgt
gtaacatttgtcaatgaatttggagtggaggaagctggtatcgatggcggtggaattttc
aaagattttatggagaatattactcgagctgcatttgacgtgcagtatgggttatttaag
gaaacagctgatcaccttttatacccaaatcctggttcgggaatgatacatgaacaacac
ctccaatttttccatttcttgggatcactccttgctaaggccatgtttgaaggaattctt
gtagatataccatttgcaacattcttcttgagcaaattgaaacaaaagtacaactattta
aatgatttgccttccttggaccctgagttatatcgtcaccttattttcttgaagcattat
aaagaggacatttcagagttggagctctactttgtaattgtgaataatgaatatggagag
caaacagaagaagagctgcttccaggaggcaaaaacattcgtgttactaatgagaatgtt
atcacatttattcatcttgtatctaaccaccgattgaattttcagatacgacaacaaagt
acacatttccttaggggatttcagcaacttatgcggaaagagtggattgatatgtttaat
gaacacgagttgcagcttctgatatcaggttcacttgacagcttggatgttgatgaccta
cgacagaacactaattatgcagggggctatcatggtgagcactatgtcattgatatgttt
tgggaagtcctcaaaagcttttctctggaaaaccaaaagaaatttttgaagtttgtgact
ggttgttcccgaggaccgttgctgggattcaaatatcttgaacctttattttgcatacaa
agagccgctggaagtgcctctgaagaagcattggaccggttaccaacgtctgcgacttgt
atgaaccttttaaagcttccaccatacggaagcaaagagcaactggaaaccaaattgcta
tatgctataaatgcagaggctggttttgatttgagttga
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