Gossypium arboreum (tree cotton): 108457330
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Entry
108457330 CDS
T05776
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
gab04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108457330
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108457330
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gab01009
]
108457330
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108457330
03036 Chromosome and associated proteins [BR:
gab03036
]
108457330
Protein phosphatases and associated proteins [BR:
gab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108457330
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108457330
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108457330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF4187
Motif
Other DBs
NCBI-GeneID:
108457330
NCBI-ProteinID:
XP_017611827
LinkDB
All DBs
Position
7:complement(3078970..3085831)
Genome browser
AA seq
545 aa
AA seq
DB search
MSLSLKMEIDTVEDVTCLNPELLQLPEVSPFALKTTPLLVDDLFSQWLSLPETGNLVKSL
INDAKAGTAVNACANFSNVNAVGSNSLPSMFSSVNAPPLSPRSSSGSPRSSKQKSSPSAL
GSPLKLFSDPMQEVIPQFYFQNGRPPTKELKEQSLSKINHLFNNPLNGLLIDEFKTVTKE
VCKLPSFLSSALFRKIDVDCVGIVTRDAFVTYWVDGNMLTMDVATQIFEILKRPGNRHLT
QVDFRPILRELLATHPGLKFLQNTPEFQDRYAETVIYRIFYHMNRSGNGRLTCRELKRGE
LISAMQQADEEDDINKVLRYFSYEHFYVIYCKFWELDTDHDFFIDRENLIRYGNHALTYR
IIDRIFSQAPRKFAGDVEGKMGYEDFVYFMLSEEDKSSEPSLEYWFKCIDLDGNGVLTPN
EMQFFYEEQLHRMECLALEPVLFEDILCQIIDMIAPEREDCITLQDLKGSKLSGNVFNIL
FNLNKFMAFETRDPFLIRQEREDPTLTEWDRFAHREYIRLSMEEDVEDASNGSADVWDES
LEAPF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttatctttaaaaatggaaatcgatacagtggaagacgttacttgtttgaaccct
gagcttttgcagcttcctgaagtgtccccatttgcactaaaaaccactcctctacttgtc
gatgacttgttctctcaatggctttcacttccggagactggcaatctggtgaaatctttg
atcaatgatgcaaaggcagggactgcagtcaatgcctgtgcaaacttttctaatgtaaat
gctgttgggagcaactcattgccttccatgttttccagtgtcaatgcacctccactttct
ccaagaagctcatcgggttctcctcgctcatcaaagcagaaatccagcccttcagctctt
ggctctccattgaaattatttagtgatccaatgcaagaagtcattccacagttttatttt
caaaatggtcgtcctcctacaaaggaattgaaagaacaatctctttctaaaattaatcac
cttttcaataatcctctaaatggattgctaatagatgagtttaaaacagtgacaaaggaa
gtttgcaagctaccatcttttctatcttccgcgctttttagaaagatagatgtagactgc
gtgggaatagtgaccagagatgctttcgttacgtattgggtggatggcaatatgctgaca
atggatgtagccactcaaatatttgaaattcttaagcggccaggcaacaggcacctcact
caggttgacttcagacccattcttcgagagcttttggcaacccatccaggattgaaattc
ttgcaaaacacacctgaatttcaagatagatacgctgaaactgtcatatacagaatcttt
tatcacatgaatagatcgggaaatggccgtcttacctgcagggagctcaaacgtggagaa
ctgatttctgccatgcaacaagcagacgaggaagatgacattaataaagtccttaggtac
ttctcctatgagcatttctatgttatatactgtaagttctgggagttggacacagaccat
gatttcttcatcgacagagaaaacctcatcagatatggcaatcatgcccttacctacaga
atcattgatagaattttttcacaagctcctcggaagtttgctggtgatgtagaagggaag
atgggttatgaagactttgtttacttcatgctctcagaggaggacaaatcatctgaacct
agtcttgaatattggttcaagtgcatagatttggatggaaacggtgtgctcactccaaat
gaaatgcaatttttctatgaggagcagctgcaccgaatggaatgcttggccctagaacct
gtgctctttgaggacatattgtgtcaaataattgacatgattgcacccgagagagaagac
tgtatcacattacaggacttgaaagggagcaaactttcaggaaatgtttttaacatcctt
tttaatcttaataagtttatggcattcgaaacccgtgatccattcctcattcggcaggaa
cgagaggatccaactttgacagagtgggatcgctttgcacatagggagtatatcaggctt
tcaatggaagaagatgttgaagatgcctcaaatggaagtgctgatgtatgggatgagtcc
cttgaagctccattctaa
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