Gossypium arboreum (tree cotton): 108457334
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Entry
108457334 CDS
T05776
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108457334
03036 Chromosome and associated proteins [BR:
gab03036
]
108457334
Transcription factors [BR:
gab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
108457334
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
108457334
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
CDC45
Motif
Other DBs
NCBI-GeneID:
108457334
NCBI-ProteinID:
XP_017611830
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Position
9:complement(6932848..6939128)
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AA seq
639 aa
AA seq
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MTDGHLFNNISLGGRGGTNPGQLKIYSGGILWKKQGGGKAVEVDKTDILGVTWMKVPRTN
QLGVRIKDGLYYKFTGFRDQDVASLTSFFQNNCGIAPEEKQLSVSGRNWGEVDLSGNMLA
FMTGAKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFREKIMSVADVGAGVEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSTLSIN
EDLLNTKYKDRLEPSYKGLIHEVFTTVMRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISSKGLKIMNLGDVRTTDGVAEILQNDDDDAVDPHLERIKNEAGGDESDE
EDEDFVLDKDDGGSPTDDSGEEDSDASDSGDEKEKPAKRDPRKEASSSKATKKKSKDGQD
DGKKKKRRKKDPNAPKRAMSGFMFFSQVERENIKKTNPGASFAEVSRILGEKWKKLSEEE
KEPYEAKAKVDKRRYDVERNAYKNPQPMNIDSGNESDSE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgactgacggccatctcttcaacaacatctccctcggcggccgaggtggcacgaatcct
ggacagcttaaaatttattcaggggggattttatggaagaaacaaggaggtggaaaagct
gtagaagttgataagactgatatcttaggggttacatggatgaaggtccctaggacaaat
caacttggtgttagaatcaaagatgggttgtattacaaattcactggattccgtgaccag
gatgttgccagtttgaccagtttttttcagaataattgtggaatagccccagaagaaaag
cagctttctgtcagtggtcgtaattggggagaagttgatttaagtgggaatatgcttgcc
tttatgactggtgcgaaacaagctttcgaagtgtctttagcagatgtgtcacaaacacag
cttcaaggaaaaaatgatgtcatcttggagttccatgtggatgatacaactggagctaat
gagaaagattcactgatggagataagtttccacatacctaattctaatacccaatttgtt
ggtgatgaaaaccgcccacctgctcaggtttttcgtgaaaaaatcatgtcagtggccgat
gttggtgctggagttgaggaagctgttgttactttcgagggcattgcaatcctcacacca
aggggtcggtacagtgtcgaacttcatctttcattcttgagactccaagggcaggcaaat
gatttcaaaattcagtatagcagtgttgttcgcctgtttttgcttccaaagtccaaccaa
cctcacacttttgttgttgtcacgcttgatccacctatccgcaaagggcaaactttgtac
ccccatattgtcatgcagtttgaaactgattatgtcgttcaaagcaccttgtccataaat
gaggatcttttgaatacaaagtacaaggacaggttggaaccttcttacaagggactcatc
catgaagtgtttaccacagtaatgcgtggtttatctggtgcaaaagttacaaagccagga
aaattccgtagctgccaagatggttatgcggtcaagtcttccctgaaagcagaagatggt
gtcctgtatccacttgaaaagagcttcttctttctacccaaaccacctacacttattctt
catgaggagattgactatgttgaatttgagaggcatgctgctggtggctcaaatatgcat
tactttgatcttctcataagattaaaaactgagcaagaacatttattccggaatattcag
agaaatgaatatcacaatttgtttgactttatcagttcgaagggtttgaaaattatgaac
cttggagatgtacggaccacagatggggtggctgaaattctccaaaacgatgatgatgat
gctgttgatcctcatcttgaacgcattaagaatgaagctggtggggatgaaagtgacgag
gaggatgaggatttcgttcttgacaaggatgatgggggatcaccaactgatgattctggg
gaagaagattcggatgctagtgacagtggagatgagaaagagaagcctgccaaaagggat
cccagaaaggaagcttcttcttctaaggcaactaagaaaaaatctaaagatggacaagat
gatgggaagaagaaaaaaaggagaaagaaggatccaaatgcaccaaagagggctatgtcg
ggtttcatgtttttctcacaagtggagagggagaacataaagaaaactaatcctggagct
tcgtttgctgaggtatcgagaatactcggagagaagtggaaaaagctgtcagaggaggaa
aaagaaccatatgaagcaaaggctaaagtagataaaagacgatacgatgttgaaaggaat
gcatataaaaatcctcagccgatgaacatagattcaggaaatgaatctgacagtgaataa
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