Gossypium arboreum (tree cotton): 108457399
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Entry
108457399 CDS
T05776
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108457399
Spliceosome [BR:
gab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108457399
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
108457399
NCBI-ProteinID:
XP_017611924
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All DBs
Position
9:2806750..2812327
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AA seq
460 aa
AA seq
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MSTSSQTQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVE
FVDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDTPGNVLLVTIEGVE
ANDVTIETIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLL
PDHVTSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGLMQPVVGPDGKKQEP
QSNVLLASIENMQYAVTVDVLHSVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTAAVAKE
SLEGHCIYEGGYCKLHLSYSRHTDLNVKAYSDKSRDYTISDLSLLATQGPGMPATPNTWQ
NPQNAPLYPGTDYAASAAMQAQPSAGQVPAWDPSLQARPSYGSVPGTVPGQAYQASAVPT
YMNAAPPAGSSPLSQPGATSMRMPPPGGAPLLGQPPYYGQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgtcaagccaaactcagttccgttatacccagacaccatcgaaggtcctgcat
ctccgtaatctcccatgggagtgtacagaagaggaactcgttgagctttgtaaacccttt
gggaagatcgttaacactaagtgcaatgtcggcgccaatcggaaccaagcttttgttgaa
tttgtagacttaaatcaggctatttcaatggtttcatactatgcttcgtcttcggagccg
gcacaggttcgtggaaaaacggtatatattcaatattcaaacagacatgaaattgtcaac
aacaaaagtcctggagataccccaggaaatgttttgctggttaccattgagggtgtggaa
gctaatgatgtgaccattgagacaattcacttggtattttctgcatttggttttgtgcat
aaaattgctacttttgaaaaggctgcgggattccaagcattaatccaattcactgatgct
gaaactgcatcttcagcaaggaatgccttggacggtagaagtattcccaggtacttgctt
ccagatcatgttacttcttgtcacctgcgaatttcgtattctgcacacactgatctgaat
atcaagtttcagtctcatcggagcagggattataccaatccataccttcctgtcaatcca
actgcgatggagggactcatgcagcctgtagttggtcctgatggaaaaaagcaagaacct
cagagtaatgtgctacttgcttcaattgaaaatatgcagtatgctgtgacagttgatgtt
cttcactcggtattctctgcatttggcactgtccaaaagattgctatatttgagaagaat
ggcggaacacaggcactaattcaatatccggatgtcacgactgcagctgtcgccaaagaa
tccttagagggacactgcatatatgagggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcttacagtgataaaagtagagattacacaatctca
gacctaagcttgcttgcgacacaaggtccaggtatgcctgccactccaaatacttggcag
aatcctcagaatgctccattataccctgggactgactatgcagcttcagcagcaatgcaa
gctcaaccctctgctggacaagttcctgcttgggatccaagtttacaggctagaccatca
tatggatcagtgcctgggactgttcctggtcaagcatatcaagcgtctgcagtccctaca
tacatgaatgctgcgccacctgctggttcatcacccctttcccaacctggtgcaacttcc
atgagaatgccacctccaggtggtgcaccactgctaggtcagcctccctattatggtcaa
tga
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