Gossypium arboreum (tree cotton): 108457510
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Entry
108457510 CDS
T05776
Name
(RefSeq) probable vacuolar amino acid transporter YPQ3
KO
K23678
solute carrier family 66 (lysosomal lysine-arginine transporter), member 1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108457510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108457510
Transporters [BR:
gab02000
]
Solute carrier family (SLC)
SLC66: Lysosomal lysine-arginine transporter
108457510
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PQ-loop
Motif
Other DBs
NCBI-GeneID:
108457510
NCBI-ProteinID:
XP_017612115
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Position
9:complement(74165498..74173019)
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AA seq
391 aa
AA seq
DB search
MATCGTSGECWEWARVYLDDCICSPRDQVSFGLGLISVLSWGVAEIPQIITNYKEKSVEG
LSLGFLITWIIGDLFNLFGCVLEPATLPTQYYMAVLYTMTTLILAAQAVYYGHIYPRLKY
NNMCNKDSKEYQPEGVDKIGKSISNFRVKQLTDVDRSSSPIPLPKSSPGRELYYRSARSL
SSSHTPTAGSLLAQRMTSPHSGNLVEEPLLSAYVAKQSTPPSSTKSLLCLVSAVMFISLF
NFQLSAVSKVYIGNEKINQGFVIKTGRKLLQANAVSLGDNGFEGGSKVGTFLGWAMAAIY
MGGRLPQICLNIERGNVEGLNPFMFIFALVGNSTYVASILVRSMDWFRIRPNLPWLVDAG
GCVLLDTFIVIQFIYFYKWAPQDSEDKHETS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtgcgggacaagtggggaatgctgggaatgggcgagagtttacttagacgac
tgtatttgcagcccgagagaccaagtttcgtttggcttggggttgatcagtgtactaagt
tggggcgtcgctgaaatccctcagattatcaccaactataaggagaaatccgttgaaggc
ctctccctcggtttcttgataacttggattattggggatcttttcaatcttttcggttgt
gttcttgagcctgctacccttccaacccaatactacatggcagttttgtatacaatgact
accttaattctggcagcacaagctgtatactatggtcacatttatcctcgattaaagtac
aataatatgtgcaacaaggattcgaaagagtaccaacctgagggagtggacaagattgga
aaaagcattagcaattttcgtgtgaaacaacttactgatgttgacagatcaagttctcct
attccccttccaaagagttctcctggcagagaattatactacaggtcagcaagatctcta
tcaagtagtcatactccaacagccggatcccttcttgcacaaagaatgacctctcctcat
tcaggaaatttagttgaagagccattgctcagtgcatatgttgccaaacaatctacccct
ccttcaagcaccaaatcattgttatgcttggtgtctgcagtaatgttcatcagcttattt
aatttccagctctcagccgtgagtaaagtttacatagggaatgagaaaataaatcaagga
tttgtgattaaaacaggaagaaagctcctccaggcaaatgctgtatcattaggagacaat
ggttttgaaggaggcagcaaggttggaacttttcttggttgggcaatggcagctatttac
atgggtggacgccttccccaaatttgcttaaatattgaaagaggcaatgtagagggactt
aacccttttatgtttatctttgctttggttggaaactctacatatgttgcaagcatactt
gtgagaagcatggattggtttagaatcagaccaaatttaccatggttggtggatgcagga
ggatgtgttctgcttgatactttcatagtaatacagttcatatacttctataagtgggca
cctcaagattcagaggacaagcacgaaacatcatga
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