Gossypium arboreum (tree cotton): 108457649
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Entry
108457649 CDS
T05776
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108457649
Enzymes [BR:
gab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108457649
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
90S particles
Helicases
108457649
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
108457649
NCBI-ProteinID:
XP_017612194
UniProt:
A0A0B0MG95
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All DBs
Position
8:complement(125005398..125010538)
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AA seq
498 aa
AA seq
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MEQKDSPTLVDKSFPLFSKPRRAKPSETPKPSQHPIPQTPQLEKFSSSSAAADATSISAF
SDLGLAEWAIQTCKELGMRKPTPVQTHCIPKILAGRDVLGIAQTGSGKTAAFALPILNRL
AEDPYGVFALVITPTRELAFQLAEQFRALGSCLHLRCSVVVGGMDMITQAKALVSRPHVV
VATPGRVKVLLEENPDIPKVFQRTKFLVLDEADRVLDVGFEEELRVIFQCLPKNRQTLLF
SATMTSNLQTLLELSANKAYFYEAYEGFRTVETLKQQYVFIPKTVKDAYLVHILTKMEDM
NIRSAMIFTSRCRDCHLLSLLLEELEVEAAALHSLKSQALRLSAVQHFKSGRVSILLATD
VASRGLDIPTVDLVINYDLPRYPRDYVHRVGRTARAGRGGLAVSFVTENDVDLVHEIEAE
LGKQLEKFECKENEVLSDFTKVLKAKRVATMKMMDDGFEEKVKERKKQKLKTLAEKGLLK
KRSKKRKREKASAKPSDK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaaagattctccaactttagttgacaaaagctttcctcttttctctaagccc
cgtagagccaaaccaagtgaaacccctaagccctcccaacaccctattccccaaactccc
caattggaaaaattttcctcctcatccgccgctgctgatgccacctcaatttctgctttc
tccgacctgggcctagccgaatgggccatccaaacatgcaaagaactcggaatgcgaaaa
ccaacgccggttcaaacccactgcatacctaaaatacttgctggtcgtgacgtgttgggg
atagctcagacgggaagtggcaaaacagcggcgtttgctctaccaatattgaaccgttta
gcggaggatccttatggggtttttgcgctggtgattactccgacgagggagcttgctttt
cagttggcagagcagtttagagcattggggtcttgtttgcatttgaggtgttcggtggtg
gtgggtggaatggatatgattacgcaggcgaaagccttggtttcaaggccgcatgtggtt
gtggccacacctggaagagtcaaagttttgcttgaagagaatcctgatattcctaaagtc
tttcaaagaacgaagtttttagttttggacgaagcagatcgagttttggatgttggcttt
gaggaggaactaagagtgattttccaatgcttgccaaaaaatcgacaaactttgttattt
tctgcaacaatgaccagtaacctgcaaacactgttagagctttctgccaacaaggcctac
ttctatgaggcttatgaaggcttcaggacagttgaaacacttaagcagcagtatgttttc
atcccaaagactgtgaaggatgcttatcttgttcacattttgactaaaatggaagatatg
aatatccgctcagccatgatattcacctcaagatgcagagattgtcatcttttaagtttg
ttattagaagaacttgaagtggaagctgcagctctgcattcattaaaatcacaggcacta
aggctttcagcagtgcagcattttaaatctggaagagtttctatactgctggctactgat
gttgctagtcgtggtttagacattcctactgttgatcttgtcattaattatgaccttcca
aggtatcctagggattatgttcatcgtgtgggacgaactgcaagggctggtagaggagga
ttggctgtgagctttgttactgagaatgatgtggatcttgttcatgaaatagaagcggaa
ctaggaaaacagttggaaaaatttgaatgcaaagagaatgaagtcctgtctgacttcaca
aaggtattgaaagctaaacgtgtggccacgatgaaaatgatggacgatgggtttgaggag
aaagtgaaagaacgtaaaaagcagaaactcaagacgctagcagagaaaggattattgaag
aaaaggagtaagaagagaaagcgtgaaaaggctagtgctaaacctagtgataagtga
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