KEGG   Gossypium arboreum (tree cotton): 108457688
Entry
108457688         CDS       T05776                                 
Name
(RefSeq) signal recognition particle 54 kDa protein, chloroplastic
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03060  Protein export
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    108457688
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gab02044]
    108457688
Enzymes [BR:gab01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     108457688
Secretion system [BR:gab02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   108457688
  Eukaryotic Sec-SRP protein
   108457688
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 CLP1_P CbiA APS_kinase AAA_17 cobW AAA_16 NTPase_1 AAA_30 nSTAND3 NPHP3_N AAA_18 ParA AAA_31 KAP_NTPase AAA_24 ArsA_ATPase ResIII Thymidylate_kin ATP_bind_1 AAA_33 AAA AAA_14 GTP_EFTU NB-ARC 6PF2K SRPRB TctA NACHT AAA_19 MobB TsaE KTI12 PIF1 BRCC36_C SLFN-g3_helicase Vps23_core ATPase_2 RNA_helicase AAA_25
Other DBs
NCBI-GeneID: 108457688
NCBI-ProteinID: XP_017612252
LinkDB
Position
4:complement(82912241..82918324)
AA seq 565 aa
MQISTTASRLFSATLGPFSTNRSPTKPTKLATSWAPSASTNLASLSSRNLFTREIWGWVN
SKTATSRREMRGVVRAEMFGQLTSGLEAAWTKLKGEEVLTKENIVEPMRDIRRALLEADV
SLPVVRRFVQAVSDQAVGVGLIRGVKPDQQLVKIVNDELVKLMGGEVSELVFSKSGPTVI
LLAGLQGVGKTTLCAKLANYLKKQGKSSMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGT
EIKPSEIAKQGLEEAKKKKIDVVIMDTAGRLQIDKGMMDELKEVKKVLNPTEVLLVVDAM
TGQEAAVLVTAFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEP
FYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQTRAVARMG
SMTRVIGMIPGMGKVTPAQVREAEKNLKLMEAMIEAMTPEEREKPELLAESPDRRRRIAK
DSGKTEQQVSQLVAQLFQMRVRMKNLMGIMEGGSIPTLSNLEDAMKAEQTAPPGTARRKR
RSESRRQFADSASTRPSPRGFGAKN
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgcaaatttcgactactgcttcccgcctcttctcggcgactttgggtccattttcgacc
aaccgcagccccacaaaacctactaaacttgccacttcatgggccccctccgcttccacc
aatttggcttccctttcttccaggaacttgttcactagagagatatgggggtgggtaaat
tccaagacggccacttctaggagggaaatgcgaggtgttgtaagagctgaaatgtttggc
caactcaccagtggtctcgaagctgcttggaccaagcttaaaggagaagaggttttgaca
aaggagaacattgtggagccaatgcgtgatattaggagagcgcttctggaagcagatgtg
agtcttcctgttgttagaaggtttgtccaagctgtaagtgaccaggctgttggagttggc
cttattagaggagtaaagccggatcaacaattagttaagattgtaaacgatgagcttgtg
aaactgatgggaggagaggtttctgaactggtcttttcaaaatctggccccactgttata
ttattggctggtctacaaggggttggaaaaacaactctttgtgccaagttagctaattat
cttaaaaagcagggtaagagcagcatgcttattgcaggagatgtatacagacctgctgct
attgaccaacttgttattttgggtgaacaggtaggtgttcctgtttatacagcagggact
gagattaaaccatccgaaatagcaaagcaaggcttagaagaggccaaaaagaagaagata
gatgtagtgataatggatactgcaggaaggctgcagatagataaaggaatgatggatgag
ttgaaagaagtgaagaaagtattgaatcccacagaagttttgcttgttgtggatgcaatg
actggccaagaagctgctgtgttggtcacagcattcaatgttgagataggcattactggt
gccattttgacaaagctagatggggattctagaggtggtgcagccttgagtgttaaagag
gtgtctgggaagccaatcaagcttgtaggacgtggagagcgcatggaggacctagagcct
ttctatccagaccgcatggctggacgtattttaggaatgggtgacgttctctcatttgtt
gagaaagcacaagaagtcatgcgccaagaagatgctgaagagttgcaaaagaagataatg
agtgcgaagtttgatttcaatgatttcctaaagcagacccgtgctgttgcgcggatgggt
tccatgacccgtgttattggaatgatccctggaatggggaaggttacgccagcccaagtt
cgagaggcagagaagaatttaaagttaatggaggcaatgattgaagccatgacaccagag
gaaagggagaagccggagttattggctgagtctcctgacaggaggagaagaattgctaaa
gattctggtaaaacagaacagcaggtgagtcaacttgttgctcaactcttccaaatgcga
gttcgcatgaagaatttgatgggtatcatggagggtggatctattcctacattgagcaat
ctcgaggatgcaatgaaagcagaacaaacggctcctcctggtacagctagaagaaagagg
agatcggagtcgagaaggcagttcgcagactcggcatcaacaaggccaagccctcgtggt
tttggtgcaaagaactag

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