Gossypium arboreum (tree cotton): 108457791
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Entry
108457791 CDS
T05776
Name
(RefSeq) mRNA export factor GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
gab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108457791
03015 mRNA surveillance pathway
108457791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108457791
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108457791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
108457791
NCBI-ProteinID:
XP_017612423
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All DBs
Position
4:complement(121112988..121120489)
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AA seq
641 aa
AA seq
DB search
MEAVKLEIRRPQIVNGIGLEPDPDWSFKSLLSELDSLEKKLNLSSSVSLPFAKTKSREIY
GEKGTKRSSNAFVMRVSDEEFEDSEGENEEVRDRGLVKAARFNCNEFYFSSSDDDSDDQP
CLDVQTYLMNEVGLVESALYELTHEHQLGVKEEIRNTISALETDLMNESEKSSSAHTKVE
KYREARREVERKFDVQYQRRVAEGLDNHLTAVQRDHELKSQIEERKIRSDAAHEEAKRRE
KALQEERLRQEKAKAEAELQAKLKAEEANRAALEAERIAAKEAAEKEAAKASKANTSEVP
QTEASGGPNATSSRVENDKTNKSELAGNMLRAAESALKLERERLQKLKELEEINQSLRSS
SNQNFDSTGRLIGRLIRQISGNKDKVSTQASELVKIFNNPRCPQTISIAYFAQKVVSNCE
SPSHSAFACAHVIVLVTSQFPQAMDLVLAEIHRACIYTVPKHISYTKSAFESKEAYWKVI
GYKEDDGKIESTTDYLVRLDSYMKLYGALVQTEVAGCQNVHGLKEGWAWLARFLNALPAN
MYTAVALYAFLQMAGFALFRKYRSQFMKMLNFISENFLNALRSQDDPDLRPITSKIQCYL
EDKLFLQEPEGRTLQGSLLSNNMAPESDYHGPYHQQSRHFY
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgttaagttggaaattcggcgtcctcaaatcgttaatggaatcggtcttgaa
cccgacccggattggagcttcaaatctttgttatcggagcttgattccttggaaaagaag
ctcaatctctcttcttcggtttctttgccctttgcaaaaaccaaatcaagagaaatttat
ggggaaaaaggcaccaagagaagctcaaatgcttttgtaatgagagtatctgacgaggag
tttgaggatagtgaaggtgagaatgaggaagttcgtgatcgaggtttagtgaaagctgca
cgatttaattgcaatgaattttattttagtagtagcgatgatgattctgatgatcagccg
tgtcttgacgttcaaacctacttgatgaatgaggtgggattggtggagagtgctttatat
gagttaactcatgagcatcaacttggagttaaggaggaaattagaaacacaatctctgca
ttagagacagatttgatgaatgagagcgaaaaatcttcctctgcacatactaaagttgag
aaatatagagaagcaaggcgagaagtggagaggaaatttgatgttcagtaccaacgcaga
gtcgcagaaggacttgataatcatttgactgctgtccagcgggaccatgaactcaaatca
caaatagaggaaaggaaaatacgaagtgatgcagcacatgaagaagccaagagaagggaa
aaggctcttcaggaagaaagactacgccaagaaaaggccaaagcagaggcagagttgcag
gctaaactaaaagctgaggaagcaaatagagctgctttggaagctgagaggatagcagca
aaagaagcagcagaaaaggaagcagccaaagcctcaaaagctaatacttctgaagtgcca
caaacagaagcttcaggaggcccaaatgctactagttcgagagttgagaatgataaaaca
aataaatcagaattggcaggtaatatgctcagggccgctgagagtgctttaaagctagag
agggaaaggctacaaaaattaaaagagttggaagaaataaaccaatcactgagatcaagt
tcaaatcagaattttgacagcactggaaggcttattggtagattaataagacaaattagt
ggtaacaaggacaaggttagcacacaagctagtgagcttgtaaagattttcaacaatccg
cgttgccctcaaaccataagcatcgcatattttgctcagaaggttgtttctaactgcgaa
agccctagtcattctgcctttgcctgtgcacatgtcatcgtccttgtaacatcacagttc
ccacaagcgatggatcttgttcttgctgagatacatagagcttgcatttacactgtccca
aagcatatatcatacaccaagtcagcatttgaatccaaagaagcttattggaaggttatt
ggatacaaagaggatgatgggaagattgaaagtactacagattatttggtacggttggat
tcttacatgaagctgtatggggcactggttcagactgaggttgctggttgccaaaatgtt
catggtctaaaggaaggttgggcttggcttgctaggtttctaaatgcactccctgccaat
atgtataccgctgtggctttgtacgcattcctgcaaatggcaggctttgctctcttcaga
aaatacagatcccagttcatgaaaatgctgaacttcatctcagagaactttctaaatgcc
ttgaggtcccaagatgatccggacctgaggccgattacgtccaagattcaatgttacttg
gaagacaagttattccttcaagaaccagagggaagaactttgcagggttctttgttatca
aataacatggcgccagagtcggattaccatggtccgtatcatcaacaaagtaggcatttc
tactaa
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