Gossypium arboreum (tree cotton): 108457836
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Entry
108457836 CDS
T05776
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
108457836
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
108457836
NCBI-ProteinID:
XP_017612496
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Position
5:complement(26549924..26553583)
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AA seq
673 aa
AA seq
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MSSIVWFRRDLRVEDNPALLAGVRAGPVFAVFIWAPEEEGHYQPGRVSRWWLKHSLALLD
SSLRSLGTCLITKRSTDSVSSLLQIVKSTGATQLFFNHLYDPISLVRDHRAKEVLTAHGV
AVRSFNADLLYEPWDVNDDNGRPFTTFNAFWEKCLNMPFDPEAPLLPPKRITSGDVLTCT
TDVLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTSFLS
PHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYLSFNHPYSH
ERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK
VLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFDPNGE
YVRRWLPELARLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKSRLQEALSEM
WQLEASSRAAIENGTEEGLGDSSESVPFAFPQDIQMEENIEPARNNAPATTRRYEDQMVP
SITSSLLRGEHEESSLYLRSSAEDSRAEVPGTVNINREQRRDILNQAIPETARNLQLNFP
IGLRNAEDSTAESSSSSRRERDGGVVPVWSPPSSSYPEQFISEESGIGASSSFLQGHPQS
HQIINWRRLSQTG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcatagtttggtttagaagggatcttagagttgaagataatccagcactctta
gctggagttagggcaggccctgtttttgcagttttcatatgggcacctgaagaagaaggc
cattatcaacctggaagggtttcaagatggtggcttaaacatagtttggctcttcttgat
tcttctttgaggagcctgggaacttgtctcatcacaaagagatcaactgatagtgtttca
tctcttctccagattgttaaatccactggtgccactcagctcttcttcaatcacttgtat
gatcctatatctctggttagggatcatcgagcaaaggaagtattgacggcccatggtgta
gcagttcgatcgttcaatgcagatttgctttatgaaccttgggatgtaaatgatgataat
ggccgccctttcactacttttaatgctttctgggaaaaatgccttaacatgccatttgac
cctgaggctcctcttcttccacctaaaagaataacttcaggtgatgtgttaacttgcact
acggatgtgttggtgttcgaagatgaattggagaagggaagcaatgcgcttttagctcga
gcatggtcaccagggtggagcaatgcggataaagctttgacaacgttcattaatggacct
ttaattgagtactcgaagaacagaagaaaagctgatagtgcaacaacttcatttctttcc
ccccatttgcattttggggaggttagtgtccgaaaagtctttcatctcgtccgaatgaag
caggttttatgggctaatgaagggaacaaagctggtgaagagagtgtaaacttgtttctg
aagtcgattggcttgagggaatactcaagatacttgagttttaaccatccttacagccat
gaaaggcctcttctcggacatcttaagtttttcccttgggttgtcaatgagggttatttc
aaggcatggagacaaggaagaacaggttatccattggtggatgctggcatgagagagtta
tgggccactggttggctgcatgatcgtattcgagttgttgtatcgagtttttttgtcaaa
gttttgcagctcccatggagatggggtatgaagtatttctgggatactctcttggatgca
gatttagaaagcgatgctctcggttggcagtatatatccggtactctcccggatggtcgt
gagttcgaccgcatcgataatccgcagtttgaaggttacaaattcgatccgaatggagaa
tatgtccgtcggtggcttccagaacttgcaagactaccaactgattggattcaccatcca
tggaatgctcctgaatctgtactccaagctgctggcatcgagctcgggtcaaattaccct
ctgcctattgtaggaatagatgctgcaaaatccaggttgcaagaagcactttcagagatg
tggcaactagaagcatcttcaagagctgcaatcgagaatggaactgaggaaggcctcgga
gactcttccgagtcagtgccatttgcatttccgcaagacatacaaatggaggaaaacatt
gaaccagctaggaacaatgctccagctacaacacggagatatgaggatcagatggttcct
agcatcacttcttccttgttgagaggtgaacatgaagagtcttctttgtatcttagatct
tcagcagaagatagcagagcagaagttccaggaactgtaaatataaatcgagaacaacgg
agagacattttaaaccaagcgattccagaaacagcacgcaacctgcaacttaacttcccg
atcgggttgagaaatgctgaggattccacagcagaatcatctagtagtagtaggagagaa
agggatggcggagttgttccagtttggtccccgccatcttcgagttaccccgagcaattt
ataagtgaggaaagtggtatcggtgcaagctcatcttttcttcaagggcatccacagtcc
caccaaatcataaattggaggcgattatctcaaaccgggtaa
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