KEGG   Gossypium arboreum (tree cotton): 108457836
Entry
108457836         CDS       T05776                                 
Name
(RefSeq) cryptochrome-1-like isoform X1
  KO
K12118  cryptochrome 1
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:gab00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    108457836
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase Cryptochrome_C
Other DBs
NCBI-GeneID: 108457836
NCBI-ProteinID: XP_017612496
LinkDB
Position
5:complement(26549924..26553583)
AA seq 673 aa
MSSIVWFRRDLRVEDNPALLAGVRAGPVFAVFIWAPEEEGHYQPGRVSRWWLKHSLALLD
SSLRSLGTCLITKRSTDSVSSLLQIVKSTGATQLFFNHLYDPISLVRDHRAKEVLTAHGV
AVRSFNADLLYEPWDVNDDNGRPFTTFNAFWEKCLNMPFDPEAPLLPPKRITSGDVLTCT
TDVLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTSFLS
PHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYLSFNHPYSH
ERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK
VLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFDPNGE
YVRRWLPELARLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKSRLQEALSEM
WQLEASSRAAIENGTEEGLGDSSESVPFAFPQDIQMEENIEPARNNAPATTRRYEDQMVP
SITSSLLRGEHEESSLYLRSSAEDSRAEVPGTVNINREQRRDILNQAIPETARNLQLNFP
IGLRNAEDSTAESSSSSRRERDGGVVPVWSPPSSSYPEQFISEESGIGASSSFLQGHPQS
HQIINWRRLSQTG
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgtctagcatagtttggtttagaagggatcttagagttgaagataatccagcactctta
gctggagttagggcaggccctgtttttgcagttttcatatgggcacctgaagaagaaggc
cattatcaacctggaagggtttcaagatggtggcttaaacatagtttggctcttcttgat
tcttctttgaggagcctgggaacttgtctcatcacaaagagatcaactgatagtgtttca
tctcttctccagattgttaaatccactggtgccactcagctcttcttcaatcacttgtat
gatcctatatctctggttagggatcatcgagcaaaggaagtattgacggcccatggtgta
gcagttcgatcgttcaatgcagatttgctttatgaaccttgggatgtaaatgatgataat
ggccgccctttcactacttttaatgctttctgggaaaaatgccttaacatgccatttgac
cctgaggctcctcttcttccacctaaaagaataacttcaggtgatgtgttaacttgcact
acggatgtgttggtgttcgaagatgaattggagaagggaagcaatgcgcttttagctcga
gcatggtcaccagggtggagcaatgcggataaagctttgacaacgttcattaatggacct
ttaattgagtactcgaagaacagaagaaaagctgatagtgcaacaacttcatttctttcc
ccccatttgcattttggggaggttagtgtccgaaaagtctttcatctcgtccgaatgaag
caggttttatgggctaatgaagggaacaaagctggtgaagagagtgtaaacttgtttctg
aagtcgattggcttgagggaatactcaagatacttgagttttaaccatccttacagccat
gaaaggcctcttctcggacatcttaagtttttcccttgggttgtcaatgagggttatttc
aaggcatggagacaaggaagaacaggttatccattggtggatgctggcatgagagagtta
tgggccactggttggctgcatgatcgtattcgagttgttgtatcgagtttttttgtcaaa
gttttgcagctcccatggagatggggtatgaagtatttctgggatactctcttggatgca
gatttagaaagcgatgctctcggttggcagtatatatccggtactctcccggatggtcgt
gagttcgaccgcatcgataatccgcagtttgaaggttacaaattcgatccgaatggagaa
tatgtccgtcggtggcttccagaacttgcaagactaccaactgattggattcaccatcca
tggaatgctcctgaatctgtactccaagctgctggcatcgagctcgggtcaaattaccct
ctgcctattgtaggaatagatgctgcaaaatccaggttgcaagaagcactttcagagatg
tggcaactagaagcatcttcaagagctgcaatcgagaatggaactgaggaaggcctcgga
gactcttccgagtcagtgccatttgcatttccgcaagacatacaaatggaggaaaacatt
gaaccagctaggaacaatgctccagctacaacacggagatatgaggatcagatggttcct
agcatcacttcttccttgttgagaggtgaacatgaagagtcttctttgtatcttagatct
tcagcagaagatagcagagcagaagttccaggaactgtaaatataaatcgagaacaacgg
agagacattttaaaccaagcgattccagaaacagcacgcaacctgcaacttaacttcccg
atcgggttgagaaatgctgaggattccacagcagaatcatctagtagtagtaggagagaa
agggatggcggagttgttccagtttggtccccgccatcttcgagttaccccgagcaattt
ataagtgaggaaagtggtatcggtgcaagctcatcttttcttcaagggcatccacagtcc
caccaaatcataaattggaggcgattatctcaaaccgggtaa

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