Gossypium arboreum (tree cotton): 108457863
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Entry
108457863 CDS
T05776
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00500
Starch and sucrose metabolism
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
Module
gab_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108457863
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gab01003
]
108457863
Enzymes [BR:
gab01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
108457863
Glycosyltransferases [BR:
gab01003
]
Polysaccharide
Storage polysaccharide
108457863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glyco_trans_1_4
Glycos_transf_1
Glyco_trans_4_4
BLOC1_2
HALZ
Motif
Other DBs
NCBI-GeneID:
108457863
NCBI-ProteinID:
XP_017612539
LinkDB
All DBs
Position
6:1035395..1044291
Genome browser
AA seq
1052 aa
AA seq
DB search
MAAKCSICFFSYGFNGLSEGNYGNDVDSWKKNVSLFLPSRRRLLPVCCKIQRRNLSSYNR
RQEKKPPFERIRPSAKLQPNSDDEFDPEHSVPNNGDMEPSVNCEKTFEDDVDTRGDAEHT
DEKNSGTQSASAIETNRDVKHADEQITDSSAQSAVAKASAINGVGAELLSSVQPDNLIGM
IKNAERNILLLNQARVHALEDLHKILSEKETLKGEINNLEKRLAEADAQIKFASQEKVHA
ELLEDQLENLQNELINRGGSGKSELELYENRSKISNEGALLAHDGHVHSLSKEVDSLRTE
NLALKYDIQALKSMLSNLKNTDKRIVTLENESSFLESSMKELESKLSVSQQESSNISTLK
TECKDLWAKVENLQLLLDKATKQADQAILVLQQNQDLRKKVDKLEESLEAATVFKASSEK
TQQYNELMQQKIKLLEERLQKSDQEIYSYVQLYQESIKEFRDTLNSLKEESKKRALDEPV
DDMPWEFWSCLLLTIDGWVLENKILNSEAVPLREMVWKRDRRICDAYVMCKEKTEDEVIS
TFLQLISSQASPGLHVIHIAAEMAPVAKVGGLGDVVTGLGKALQKKGHLVEIVLPKYDCM
QYDRVRDLRVLDATVYSYFDGKLFQNKVWTGTVEGLPVYFIEPHHPSKFFWRGQYYGEQD
DFKRFSFFSRAALELLLQAGKKPDIIHCHDWQTAFVAPLYWDLYFPKGLNSARICFTCHN
FEYQGAAPASELASCGLDVQQLNRPDRMQDNSAYDRVNPIKGAIVFSNMVTTVSPTYAQE
VRTAEGGKGLHSTLNFHSKKFMGILNGIDTDAWDPATDIFLKVQYTANDLQGKAENKAAM
RRHLRLSSADDSQPLVGCITRLVPQKGVHLIRHAIYRTLEMGGQFVLLGSSPVPHIQREF
EGIANQFQDHEHIRLILKYDESLSRYIYAASDMFIIPSIFEPCGLTQMIAMRYGSVPIVR
KTGGLNDSVFDVDDDTIPYQYRNGFTFTTPDEQGLNGALDRAFNLYNNDSETWQQLVRKD
MNIDFSWRSSASQYEELYAKSVARARAATSRT
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaagtgttcgatttgttttttcagctatggatttaacggtttgagtgaaggt
aattatggaaatgatgttgatagttggaagaagaacgtatcattgtttttgccttctcgt
cgtcgtttacttcctgtttgttgtaaaatacagcgacggaatctcagttcatataataga
agacaagagaagaagcctccttttgaacggattcgaccaagtgcaaagttgcagccaaat
agcgatgatgaatttgatcctgaacattctgtcccaaataatggagatatggagcctagt
gttaattgtgaaaaaacttttgaagacgatgttgacactaggggagatgcagagcatact
gatgaaaagaattcgggtactcaatctgcctctgccattgagactaacagagatgtaaag
catgccgatgagcagataacggacagctccgcacagtctgctgtagcaaaagcttcggcc
ataaacggagttggtgcagagctgctctcaagtgttcaaccagacaacctgataggcatg
ataaaaaatgcggagagaaatatccttcttctcaatcaagctcgggttcatgcactagaa
gatcttcataaaattctcagtgagaaggagacattgaaaggtgaaattaacaatttggaa
aaaagattggctgaagctgatgcacagattaaatttgcttctcaagaaaaggtgcatgca
gaactattagaagatcagttagagaatttgcaaaatgaattgattaataggggtggttct
ggaaaaagtgagcttgaattgtatgagaatcgaagcaaaatttccaatgaaggggcactt
ttggcacatgatggtcatgttcattctcttagcaaggaagttgattcattgaggacagaa
aatcttgccctaaaatatgatatccaagcgcttaaatcaatgcttagcaatttgaagaac
actgataaacgcatagtaacactggaaaatgaaagctcttttctagagtcctccatgaag
gagttggaatctaaactgtcagtttctcagcaagagtcttcaaatatttctaccctaaaa
actgaatgcaaggacctatgggcaaaggtagaaaatttacaactcttgctggataaggca
actaaacaggccgaccaagccattttagtgttacagcaaaaccaggatcttcggaagaag
gttgataaattggaagaatctcttgaagcggctactgtctttaaagcctcatctgagaaa
acccaacaatataatgaacttatgcagcaaaagataaaactactagaggagcgtcttcaa
aagtctgatcaagagatatattcgtatgttcaattatatcaagaatctataaaggaattt
cgggacacccttaatagtttgaaagaagaaagcaagaaaagggcattggacgaaccagtt
gatgatatgccttgggaattttggagctgtttattgcttactattgatggttgggtgctt
gagaataaaatattgaacagtgaggcagtgccgttgagagaaatggtgtggaagagggat
cgacgcatttgtgatgcatatgtgatgtgcaaagaaaagacagaggatgaagttatatct
acatttctccagctgatatcatcacaagctagtccagggttgcatgtcattcatattgct
gctgagatggcaccagttgctaaggttggtggcttgggagatgttgtgactggtcttggt
aaagcattacagaagaaaggacaccttgtggagattgttcttccaaaatatgattgtatg
caatatgatcgtgttcgtgacttaagggtcttagatgcgacagtatactcgtatttcgat
ggcaaactatttcaaaataaagtttggactggtactgttgaaggtcttcctgtttatttt
atcgagccacatcatcccagcaagttcttttggaggggacaatattatggagagcaagat
gatttcaaacgtttttcatttttcagtcgtgcagcacttgagttgcttcttcaagctggc
aagaaacctgacataattcattgccatgattggcagacagcttttgttgcaccactttac
tgggacttgtattttccaaaaggtttgaattcagctcgaatatgttttacttgccacaat
ttcgagtaccaaggggcagcacctgcttcagaattggcatcatgcggtttggatgtccag
cagctaaacagacctgatagaatgcaggataactcggcatatgatagggtcaatcctatt
aagggtgcaattgtgttctctaacatggtaacaacagtgtcaccgacttatgcacaagag
gtccgaactgctgagggaggaaaaggcctccattctacacttaattttcactcaaaaaag
ttcatggggatcttaaacgggatcgatactgatgcttgggatcctgccaccgatattttt
ctcaaagtgcagtatactgctaacgatctgcaaggaaaagcagaaaataaagctgccatg
agaaggcatctaagactttcttctgctgatgattctcagcctctggtgggctgcataaca
agattggtgccacaaaagggtgtgcatctaattagacatgccatttatcgaacgttggag
atgggtggtcagtttgtgcttcttggttcaagtccagttccccacattcagagggagttc
gaaggtatcgcaaaccaatttcaagatcatgaacacatccggttaatattaaaatatgac
gagtctctttctcgttacatttatgcagcatctgacatgttcataattccatctattttc
gagccttgtggccttacacagatgatagcaatgagatatggttccgttccaattgtaaga
aaaactggtggtctaaatgacagcgttttcgatgttgacgacgacacaataccttaccaa
tatcgaaacggttttacgtttacaactcctgatgaacagggactaaacggtgcattagat
cgtgcatttaatctctacaacaatgacagcgagacttggcaacaacttgtccgaaaggac
atgaacatagatttcagctggcgttcttcagcatcacaatacgaggagctttacgcgaaa
tccgtcgccagagcaagggcagccacaagtcgcacgtaa
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integrated database retrieval system
