Gossypium arboreum (tree cotton): 108458181
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Entry
108458181 CDS
T05776
Name
(RefSeq) YTH domain-containing protein ECT2-like isoform X2
KO
K20102
YTH domain-containing family protein
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108458181
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108458181
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
108458181
NCBI-ProteinID:
XP_017612964
LinkDB
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Position
2:complement(66547465..66555926)
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AA seq
625 aa
AA seq
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MPMAHQTSDRMTSTDSAEVFNVMVLDSNILSNPNALTNKDLIAVGSLRDGSSHQSGFMPS
VVESTTTYLPNAYSPEAQFHQEAHKQSSLLPYVNAEGLDNGFHDIYNETASLGFHGLGHS
PQMQQRAYAPVSSYLPPVGDPIGLSNARHFITIDSSYHQPSVSRNIPHVTSKAQFSHLEC
PVNIEQQLVGKRFGLGTNYLPQSGSFDGGRNFFGSSSSLCSSYQGSDGFAVGGFCSDWSK
PFSGKSSLFRPSYAPASPKRVGSLEFSSNDPAMVSFQKGPFNGFGCTSSSSRGYSGSKSD
QRSCHGSVSTNSLGISGHNWPTLAEARQGGSCNDFSCSCTVTLDTLSERNRGPRAFKPKT
QITTKGFIVDSSKNGTINGITNGSYNRQNFVTDYEGAKFFVIKSYSEDNVHKSIKYGVWA
STPIGNKKLDTAYHEAKAKQGTCPVFLLFSVNASAQFCGVAEMVGPVDFDKSVDYWLQNK
WSGQFPVKWHIIKDVPNSQFRHILLKSNDNKPVTNSRDTQEVEFEQGIEMINIFKNYESH
SSILDDFYFYEERQKAMQERKARQLTSLVASDDLVCEASNLVSLPNDIVKKMSKSFAEVL
LLNENEQAGGGTGKVLSAACGGHGR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgccaatggctcaccaaacttctgatcgaatgacctctactgactcggcagaggttttc
aacgttatggttctggatagcaacatcctttctaacccgaacgctttgactaataaggat
ttgatagctgttggttccttgagggatggttcatcccatcagtcgggattcatgccatct
gttgttgagtccacgacaacctatttgccgaatgcctattctcctgaggcacagttccat
caagaagctcataaacagagttcattgcttccatatgttaatgctgagggtttggacaat
ggttttcatgacatttacaatgaaactgcatctcttgggtttcatggtcttgggcatagt
ccacaaatgcaacaaagagcttatgctccggtttcatcttatctgcctcctgttggggat
cctatcgggctgtccaatgcaaggcatttcatcaccatagattcatcttatcaccagcca
tcagtttcccgaaatattccacatgttacttcaaaggcccagttttctcatttagagtgt
cctgtaaatattgagcaacaattggttggaaaaagatttgggctgggaaccaattacctt
cctcagtcaggatcatttgatggaggaagaaacttctttggaagctccagcagtctttgc
tcttcataccaagggtctgatggttttgcggttggtggattctgctcagactggtcaaag
ccttttagtgggaagagttctctgtttcgtccctcatatgcaccagcttctccaaaacgg
gttggttcactagagttttcttcaaacgaccctgcaatggtttcttttcaaaaagggcca
tttaatgggtttggttgtactagctccagctctagaggctacagtggtagcaaaagtgat
caacgttcttgtcatggcagtgtctctactaatagtttaggaataagtggtcataactgg
cctacgcttgctgaagcaagacaaggagggagctgcaatgacttctcctgcagttgtact
gtaacgcttgatacactaagtgagcgtaataggggacctagggcatttaagccgaaaaca
cagataactacgaagggttttattgttgatagcagcaagaatggcacaattaatggcatt
accaatggatcctacaaccgacagaattttgtcactgattatgagggtgccaagttcttt
gtgataaaatcttatagtgaagataatgttcacaagagcattaagtatggtgtctgggca
agcactcctattggcaacaaaaaattagatactgcttatcatgaggcaaaagctaaacaa
ggaacatgccctgtctttctcttattttcggtcaatgctagcgctcagttttgtggagtg
gctgagatggtgggacctgttgactttgataaaagtgtggattattggcttcagaataag
tggtctgggcaattccctgtaaagtggcacattattaaagatgtccccaatagtcagttc
cgccacattctactaaaaagtaatgacaacaagcctgttactaacagtagagatactcaa
gaggtggagtttgaacagggcattgagatgataaacattttcaagaattatgaaagtcat
tcttcaatccttgatgacttttatttttacgaagagcggcaaaaagcaatgcaggaaagg
aaggccaggcagctaactagcctagtggcttccgatgatttagtgtgtgaagcatcaaac
ctcgtctcactccctaatgatatcgtgaagaaaatgtccaagagctttgcagaagttctt
ttgttaaacgagaatgagcaagcaggcggaggaactggaaaggtgctctctgctgcctgt
ggaggccatggtagatag
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