KEGG   Gossypium arboreum (tree cotton): 108458256
Entry
108458256         CDS       T05776                                 
Name
(RefSeq) ESCRT-related protein CHMP1B-like isoform X1
  KO
K12197  charged multivesicular body protein 1
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03272  Virion - Hepatitis viruses
gab04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    108458256
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108458256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gab04131]
    108458256
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gab04147]
    108458256
Membrane trafficking [BR:gab04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    108458256
Exosome [BR:gab04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108458256
  Exosomal proteins of other body fluids (saliva and urine)
   108458256
  Exosomal proteins of colorectal cancer cells
   108458256
SSDB
Motif
Pfam: Snf7 Ist1 Ham1p_like
Other DBs
NCBI-GeneID: 108458256
NCBI-ProteinID: XP_017613066
LinkDB
Position
6:1614101..1615773
AA seq 210 aa
MGNTEKLLNQIMELKFTSKSLQRQSRKCEKDEKSEKLKVKKAIEKGNMDGARIYAENAIR
KRNEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDQ
FEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPNAAAHAVP
TKTEEKVDEDDLSRRLAELKARVFCMESLW
NT seq 633 nt   +upstreamnt  +downstreamnt
atggggaacaccgagaagctcttgaaccagatcatggagctgaaattcacgtccaaatcg
ttgcaacgccagtcgaggaagtgcgagaaggacgagaaatccgagaaattgaaggtgaag
aaggcgatcgagaaaggtaacatggacggagctcgtatctacgccgagaacgccattcga
aagcgcaacgagcagatgaactacctccgtcttgcctcgcggctcgatgccgttgttgct
aggcttgatactcaagctaagatgactaccattaacaagtccatggctaatattgttaag
tcacttgaatcttcattggccacaggaaatttgcagaaaatgtcagaaacaatggatcaa
ttcgagaagcagtttgtaaatatggaggttcaagcagagtttatggagagtgctatggct
ggttctacttcgttatcgacacccgaaggtgaagtcaacagcctgatgcagcaagtggct
gatgattacgggttagaggtctccgttgggttgccaaacgctgctgctcatgctgttccg
acgaagactgaagagaaggtcgacgaggatgatttgtcaaggcggcttgcagagcttaaa
gctcgagtgttttgcatggaatccttgtggtaa

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