KEGG   Gossypium arboreum (tree cotton): 108458272
Entry
108458272         CDS       T05776                                 
Name
(RefSeq) THO complex subunit 4A-like
  KO
K12881  THO complex subunit 4
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03013  Nucleocytoplasmic transport
gab03015  mRNA surveillance pathway
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108458272
  09122 Translation
   03013 Nucleocytoplasmic transport
    108458272
   03015 mRNA surveillance pathway
    108458272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gab03019]
    108458272
   03041 Spliceosome [BR:gab03041]
    108458272
Messenger RNA biogenesis [BR:gab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108458272
    TREX complex
     108458272
Spliceosome [BR:gab03041]
 Complex C
  Other components
   EJC/TREX
    108458272
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108458272
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 108458272
NCBI-ProteinID: XP_017613093
LinkDB
Position
4:complement(14465153..14468757)
AA seq 238 aa
MSGSLDMSLDDIIRNKSRSEGHSRDSRRKPRAPAPGPDRRGPIRDQPRINPYPVRPMQLE
VPAWQGQLVSSGALDVEAKLYISNLDYGVSNEDIKVLFSEVGDLKRYSINYDKSGRSKGT
AEVVFFRQADALAAIKRYNNVQLDGKPMTIELVGANVVMSASVPPTKSGILRAPNMASRR
DLEKIGVGRGWVRGGVSRRFGRGRGHEHERDGPIGKKLSAEDLDADLDRYHLEATRIK
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtccggttcactggacatgtccctcgacgacatcatccgaaataaaagcagatccgaa
gggcattctcgtgattcccgacgcaagccacgtgcccccgccccaggacctgatcgtcgt
ggccccatccgcgaccagccaagaatcaacccgtacccagtcagaccaatgcaattagag
gtgcccgcatggcagggacagttggtttcgagtggagcactggatgtggaggcgaagcta
tatatatcgaacttggattacggtgtttctaatgaggatattaaggtgcttttctctgag
gttggtgacttgaagaggtactcaattaattacgataagagtggaagatcaaagggaact
gcagaagttgtctttttcagacaggcagatgctttggcagctatcaagcgatacaacaat
gttcaacttgatggaaaaccaatgacaattgaacttgtgggagctaatgtggttatgtct
gcgtccgtccctccgaccaaaagcggcattctgagagcaccaaatatggcctctagaagg
gatctagaaaagattggtgttggaaggggatgggttcgtggtggtgtcagccgcagattt
ggtcgaggacgtggacatgaacatgaacgagatggaccaattggtaagaaattatctgca
gaagatcttgatgctgatttggacaggtaccatttagaagctacaagaattaaatga

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