Gossypium arboreum (tree cotton): 108458272
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Entry
108458272 CDS
T05776
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
gab03015
mRNA surveillance pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108458272
09122 Translation
03013 Nucleocytoplasmic transport
108458272
03015 mRNA surveillance pathway
108458272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108458272
03041 Spliceosome [BR:
gab03041
]
108458272
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108458272
TREX complex
108458272
Spliceosome [BR:
gab03041
]
Complex C
Other components
EJC/TREX
108458272
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108458272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
108458272
NCBI-ProteinID:
XP_017613093
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All DBs
Position
4:complement(14465153..14468757)
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AA seq
238 aa
AA seq
DB search
MSGSLDMSLDDIIRNKSRSEGHSRDSRRKPRAPAPGPDRRGPIRDQPRINPYPVRPMQLE
VPAWQGQLVSSGALDVEAKLYISNLDYGVSNEDIKVLFSEVGDLKRYSINYDKSGRSKGT
AEVVFFRQADALAAIKRYNNVQLDGKPMTIELVGANVVMSASVPPTKSGILRAPNMASRR
DLEKIGVGRGWVRGGVSRRFGRGRGHEHERDGPIGKKLSAEDLDADLDRYHLEATRIK
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtccggttcactggacatgtccctcgacgacatcatccgaaataaaagcagatccgaa
gggcattctcgtgattcccgacgcaagccacgtgcccccgccccaggacctgatcgtcgt
ggccccatccgcgaccagccaagaatcaacccgtacccagtcagaccaatgcaattagag
gtgcccgcatggcagggacagttggtttcgagtggagcactggatgtggaggcgaagcta
tatatatcgaacttggattacggtgtttctaatgaggatattaaggtgcttttctctgag
gttggtgacttgaagaggtactcaattaattacgataagagtggaagatcaaagggaact
gcagaagttgtctttttcagacaggcagatgctttggcagctatcaagcgatacaacaat
gttcaacttgatggaaaaccaatgacaattgaacttgtgggagctaatgtggttatgtct
gcgtccgtccctccgaccaaaagcggcattctgagagcaccaaatatggcctctagaagg
gatctagaaaagattggtgttggaaggggatgggttcgtggtggtgtcagccgcagattt
ggtcgaggacgtggacatgaacatgaacgagatggaccaattggtaagaaattatctgca
gaagatcttgatgctgatttggacaggtaccatttagaagctacaagaattaaatga
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integrated database retrieval system