Gossypium arboreum (tree cotton): 108458357
Help
Entry
108458357 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108458357
KO
K08518
syntaxin-binding protein 5
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108458357
Membrane trafficking [BR:
gab04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108458357
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
108458357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
PEP5_VPS11_N
WDR55
ANAPC4_WD40
Synaptobrevin
WD40_Prp19
TFIIIC_delta
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
108458357
NCBI-ProteinID:
XP_017613207
LinkDB
All DBs
Position
4:complement(17656976..17667580)
Genome browser
AA seq
1106 aa
AA seq
DB search
MFAKIFHKRGISSHSKKPKKNDSGGSLMSANLNPRMTVHYGIPATASILACDLIQRLVAV
GTLDGRIKVIGGEYVEALLVSPKHIPFKNLEFLQNQGFLVSVSNENEIQVWDLGQWQIAS
SIKWESNITAFKAIHGTSYMYLGDEHGMVYVLKYDADQRKLTNLPYYVPTNVIAEEAGIS
SPHPSVVGVLPQPCSQGNRVLIAYVNGLIVIWDVSDDKVVLVRGNKDLQLQGETASGSPE
NKNLEVSDCVSESDKVEKEISSLCWASNDGSILAVGYVDGDIMFWALPTATSKNNQQASK
SHKNVVKLQLSSGEKRLSVIVLHWSENQSHSARGCKIFFYGGDQIGSKETLTILDLERPS
GIESLKCVSRVDITPNGSFADMVLFPTVGEMENGGSLLSVLTNPGQLHVYDDACLAAFKS
QDEKKPCVSSGQYVMPIPIVAPCMTVSKLSLVDRDGEFSKALSKIVSTAKLKAPHTPIRS
SKKWPLTGGIPSRLPEAADYEVERVYMAGYQDGSVRMWDATYPALSLIFILGAEIYGKVP
GIDIAVASAPVSALEICSFTQSVAIGNECGMVCLFKLTGTSNEMSLNIVTDTEKKVHTLH
QADGPQCMALFSLFSSPVCFLQSTEFGNRLAVGFKCGRVAMLDAGTSSVLFITDSLSLSN
CSVSSLAMIFFTDTNTLINNSKDSTSTSLNDGEKGLAFIMTRDAYLAVLDGRTGHMVSCQ
SIPQKKKSSAISMYILEGGNIVSSTVISESKNEPAHSSTDPEIAPVEPKSETAAQVAYLG
QRSKRLLILLCFEDALYLHSLKSVIKGTCDSIREVNLKQCCWTSAIKIDDKECGLVLLCR
TGIIEIRSLTKLEVMGQCSLMTILRWNFTANMEKMACSSNRGQIVLINGCEFAAVSILAL
ENDFRIPDSLPCFHDTVLAAAFDATVKSEDTSPGILGGIFKGLIGGKQDRKMQIKEACRK
DFPHLESIFSSPPFLKPSTASTDDKEVINLNIDDILIDEKITVFPKSETINNDEKNKKPE
RERLFEGSSTDAKPTVRSVYEIRAKYRGPEDAAAAAARARDRLIERQEKLKRINDRSQEL
QNEAENFASIAHQLARKMEKKKWWNI
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccaaaatcttccataaacgtggcatctcatcacattctaaaaaacctaagaag
aatgattcaggaggaagcttgatgtcagcaaatttgaatccccgtatgaccgtacactat
ggaataccggcgacggcctcaattctggcgtgtgatctcatccaacgactcgtagcagtt
ggaacattggatgggaggattaaagtgatcggtggcgaatatgtagaagcgcttctagtg
tcgcctaagcacatacctttcaaaaatttggagtttctacaaaatcaaggttttcttgtt
agcgtgtcaaacgaaaatgagattcaggtctgggatttgggacaatggcagatagcttcg
agcataaagtgggagtcgaatataactgctttcaaagccattcatggcaccagctacatg
tatcttggagatgagcacggaatggtgtatgttttaaagtatgatgctgaccaacgcaag
cttaccaacctgccctattatgttcccacaaatgttatagctgaagaggctggaatttca
tcacctcatccttctgttgttggagttctcccccaaccttgttctcagggaaatagagta
ctgattgcttacgtgaatgggttgattgtcatctgggatgtttctgatgataaagttgtt
ctagttagaggcaataaggatcttcaactgcaaggtgaaacagcatctggttccccagaa
aataaaaaccttgaggtttctgattgtgtatcagaaagtgataaagtggagaaagagata
agctctctttgttgggcatctaatgacgggtcaattcttgcggttggttatgtagatggg
gatatcatgttttgggccctaccaactgctacctctaaaaataatcagcaagcttcaaaa
tctcacaaaaatgttgttaaactacaattatcatccggagagaaacgactttcagtcatt
gttttacattggtctgaaaaccaatcccatagtgctcgtggttgcaagatttttttttat
ggaggtgatcaaattggatctaaagaaactctgacgatcttggaccttgaacggccttct
ggaatagaaagtctaaaatgtgtcagccgtgtggacattacacctaatggctcttttgcg
gatatggttttatttccaactgttggagagatggagaatggtggcagtttgttatccgtg
ttgacaaatccagggcaattgcatgtttatgatgatgcatgcttggctgccttcaagtcc
caggatgagaaaaagccttgtgtttcttcaggacagtatgttatgccaatacccattgtt
gctccatgcatgactgtgagtaagcttagtttagttgacagagatggggaattttcgaag
gctctttccaagatagtatcaactgcaaagcttaaagcaccacatactccaattagatcg
agtaaaaagtggcctttgactggtggtattcctagccgtcttcctgaagctgcagattat
gaagttgaaagagtatatatggcaggttaccaggatggatctgttcgaatgtgggatgct
acctaccctgctctttcacttatctttattttaggagcagagatatatggaaaggttcca
ggcattgacattgctgttgcaagtgcaccagtttcagcattggaaatttgctccttcact
caaagtgtagccattggcaatgaatgtggtatggtttgtctattcaagctaactggaact
tccaatgaaatgagtttgaacattgtgacagacacagagaaaaaagtccataccttgcat
caagcagatggtcctcaatgcatggccttgttctcgctcttcagttctcctgtatgtttc
cttcaatctacagaatttggtaatagacttgcagtaggatttaagtgtggccgggtcgca
atgcttgatgctggtacatcttcagtgttgttcattacagatagtttgtcactctcaaac
tgctctgtcagttctttggctatgatattctttacagataccaataccttaataaacaac
tcaaaggattctacatccacgagtctgaatgatggcgaaaaggggttggcgttcataatg
accagggacgcttacctagctgttttagatggcagaactggccatatggttagctgtcag
tcaatacctcagaaaaagaagtcgagtgccatctccatgtacattttagagggtggcaac
atagtttcgtcaacagtgatcagtgaatctaaaaatgaacctgcacattctagtactgac
cctgaaattgctccagtggaacctaaatctgagactgctgctcaagtggcatatcttggg
cagagatcaaaacgtttactcatcttactttgttttgaggatgcactgtatttacattct
ttgaagtcagttattaaggggacctgtgactccatccgggaagtgaatcttaaacaatgt
tgttggacttcagccatcaagatagatgacaaagagtgtggattggttctgctttgcagg
actggaatcattgaaataaggtctttgacaaagcttgaagtgatgggacaatgttctttg
atgactattcttagatggaacttcacagcaaacatggaaaagatggcatgttcttcaaac
agagggcaaattgtactgataaatgggtgtgaatttgctgctgtatctattctggccctt
gagaacgacttcaggattccggactctttgccttgttttcatgatacagtcctagcagct
gccttcgatgcaactgtgaaaagtgaggatacctcccctgggattttaggtggtattttt
aagggcttaataggtgggaagcaggatagaaaaatgcaaattaaagaagcttgcaggaag
gatttcccacatttggagagcatattttctagtcccccattcttaaagccttccacggcc
agcacggatgacaaagaagtcatcaatcttaacatagatgacatcctaattgatgagaaa
atcactgtcttccctaaatctgagacaattaataatgatgagaaaaataaaaaaccagag
cgagaaagactatttgagggttcaagtactgatgcaaaaccaacagttagatcagtttac
gagatcagggccaagtatcgaggaccggaggatgctgcagctgcggctgcacgggcaagg
gaccggcttatagagcggcaggaaaagctcaagaggatcaatgaccggtcacaagagcta
caaaacgaggcagagaactttgcatccattgcacatcaacttgccaggaaaatggaaaag
aaaaaatggtggaacatatga
DBGET
integrated database retrieval system
