Gossypium arboreum (tree cotton): 108458404
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Entry
108458404 CDS
T05776
Name
(RefSeq) transcription elongation factor SPT4 homolog 2
KO
K15171
transcription elongation factor SPT4
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108458404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108458404
03019 Messenger RNA biogenesis [BR:
gab03019
]
108458404
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
108458404
RNA polymerase I system
108458404
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
108458404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
108458404
NCBI-ProteinID:
XP_017613275
UniProt:
A0A0B0NMD9
LinkDB
All DBs
Position
4:116709742..116711681
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AA seq
116 aa
AA seq
DB search
MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDNERVVDCTTPNFN
GIISVMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEEVHVQYVPPKRV
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgcgcccgcacagattccgacgagtttcggacacgagctccgggcttgcctc
cgttgccgcctcgtcaaaacctacgatcagtttagggaatcgggatgtgagaactgccca
ttctttaaaatggatgaggataatgaacgcgtcgtcgattgtaccactcctaacttcaat
gggataatctctgtgatggatccgtctagaagttgggctgctcgttggctgcgaattgga
agatttgtccccggttgttacactcttgctgtttcagaggcacttccagaagacttgcag
aatttatgcgaagaagtgcatgtgcagtatgtgccacctaaacgggtatga
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