Gossypium arboreum (tree cotton): 108458420
Help
Entry
108458420 CDS
T05776
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03440
Homologous recombination
gab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108458420
03460 Fanconi anemia pathway
108458420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108458420
03036 Chromosome and associated proteins [BR:
gab03036
]
108458420
03400 DNA repair and recombination proteins [BR:
gab03400
]
108458420
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108458420
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
108458420
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
108458420
FA (Fanconi anemia) pathway
Downstream FA components
108458420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
108458420
NCBI-ProteinID:
XP_017613297
LinkDB
All DBs
Position
4:complement(111430944..111438002)
Genome browser
AA seq
1106 aa
AA seq
DB search
MSTWQIFSHAGTSFRWEASPPIVPIKPADDPNGAPVPPLPSMADLLLQGCSKLIENGDGE
FEKYPMFRTGLGKSVALKESSIAKALSILANDDAASTVTSSKLIPVNNGCGNSLFQTGSG
KMVNISSAGLVRAKTFLGLEQDNENHNFEGFQHPRRLPATNEPYDCQRFSHSGKKEDLQN
YGVMDVTSEPRHMLNSRNRLLGGELGSENDSTPMHSKMFDSVPKPPPIKFHTAGGRSLSV
SSDALKRARSLLGDPELGNFFGEMDQEVPPFTVYKEENFNDASLNKENCFFTSFPVSKDT
SKDFTSPLKSSFKQTRSIFNSENLSFGSNLIEKFDAVESSSACASAINMPSPQNALKSIN
RLSEKNFATNNSLPSGSGSQTNLPRRSFGGPLVDISNNIATSQTNNKQVMNEKRRIGRSS
FVSPFKRPRCSKISAPLNNDVSLVANDDHTCCKRTVSTKYPFQVPRVYIKEYFAVPPSAC
STLKCFPIKGKQITPANAYEYLFKDETSLCRIGAETFYDMLSHSGASVQHVSKEWVANHY
KWIVWKLACYERCYPSKCAGKFLTVSNVLEELKYRYEREVNHGQRSAIKKILEGDASPSK
MLVLCVSTIQSNSEPNMETNLEITNGTHNSGNAKVELTDGWYSINAILDVLLSKQLAVGK
LFVGQKLRIWGAGLCGWVGPVSPLEASSAISLALNLNGTCRAHWADRLGFCKGFRIPMAF
RCIKGDGGPVPLTLVGVTRIYPVLYRERLRNGGSIVRSERMESRMVQKHNQRCSVLVDHV
ISEYQRGVNSSHIHNDSESEGAKILRILETSAEPEVLMAEMSPEQLTSFATYKSKLEATR
QLEMEKSIEKALAEAGLNERDVVPFMRVRVVGLINRNYHGKGRPKEGIITIWNPTEKQEC
ELVEGQAYVVSGLIPMNSDSEILYLQARGSTNKWQPLSPLAMESFEAFFCPRKSMKLSNL
GEISLSSEFDIAAYVVYVGEVYTASHQKKQWVFVTDDSISDLQSDSLLAISFCSPSIDDD
SFAPINPNLVGSMVGFCNLIKKPKDQMNHLWVAEATENSTYYLNFKPSISHLQSAGASVQ
AWAKASSSIIDELRKKVLFVIGNCEG
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgtggcagattttttctcatgccggaacaagttttcgctgggaggcttcccct
cctatcgtaccgattaagcctgccgatgacccgaacggagctccggttcctccactccca
tccatggccgatctcctgcttcaaggatgttcgaagcttattgagaatggagatggagaa
tttgagaaatatccgatgttcagaaccggattggggaaatcggtggcattgaaagaatct
tcaattgcaaaagcattatctatcctcgccaacgacgacgctgcctctactgttacttca
agcaaactgattccagtgaacaatggctgcggtaactctctttttcaaacgggctctggg
aaaatggttaacatatcttcagctggtctggtcagagctaagacatttttgggacttgaa
caagataatgagaatcacaattttgaaggttttcaacatccaaggaggttacctgcaact
aatgaaccttatgactgccaaaggttttctcattcagggaagaaagaagatttgcaaaat
tatggggttatggatgttacatcagaaccaaggcacatgttaaactctaggaatcgttta
ctaggaggtgaactaggcagtgaaaatgactcaactccaatgcattccaaaatgtttgat
tcagttcccaaaccacctccaatcaagtttcatactgcaggtggaagatcattgtcagtt
tcaagtgatgcattgaagcgtgcaaggagtcttcttggtgacccagagctaggaaatttc
ttcggtgaaatggatcaagaggttccaccatttacagtttacaaggaggaaaattttaat
gatgcttcattaaacaaggaaaactgtttctttacttcatttccagtaagtaaagacaca
tccaaggatttcacatccccactgaaatcatctttcaagcaaacaaggtccatattcaat
tcagaaaatttaagttttgggagtaatttgattgaaaaatttgatgcagttgaaagttct
agtgcatgtgcatcggccatcaatatgccttctccacagaatgctttgaaatcaatcaat
aggctttctgagaaaaattttgcaactaacaattctttgcctagcggttctggttcacag
actaatttgcctagaaggtcatttggtgggccattggttgatatttcaaataacattgct
acatctcaaacaaataacaaacaggttatgaatgaaaagaggagaattggaagatcaagt
tttgtttctcccttcaaaagaccccgctgttccaagatctctgctccattgaataatgat
gtttccttggtagcaaatgatgatcatacatgttgcaaaagaacagtttccactaaatat
ccttttcaagtaccaagagtatatataaaggaatattttgctgtgcctccttcagcctgc
agcacgttgaagtgtttcccaatcaaaggtaaacagatcacaccagcgaatgcttacgag
tatttgtttaaagatgaaactagcttatgtcgaattggggcagaaactttttatgacatg
ttgtctcattctggagcttctgtgcaacacgtttctaaagagtgggtcgcaaatcattat
aagtggattgtttggaaacttgcatgctatgagaggtgctatccttccaaatgtgctgga
aaatttttgacggtctccaatgtacttgaggaattaaagtacagatatgagagggaagtc
aatcatggtcagcgttctgcaataaagaaaatacttgaaggggatgcttcgccttctaaa
atgttggtgctatgtgtttcaacaattcaatcaaattctgaaccaaatatggagaccaac
ctagagataacaaatggaactcataatagtggcaatgcaaaagtggaactaacagatggg
tggtactctataaatgctattttggatgtattgctatcaaagcagcttgctgttggaaaa
ttgtttgtgggacagaagctccggatctggggagcaggactttgtggctgggttgggcca
gtttcaccccttgaggcgtccagtgcaattagtttagctttgaacctgaacgggacgtgt
agagctcactgggctgatcgacttggattttgtaaaggttttcgtattcctatggcattt
aggtgtatcaagggtgacgggggtccagtccctttgactttagttggagtcactcggata
taccctgttctctacagggaaaggttgagaaatgggggatcaattgttagatctgagagg
atggagagtagaatggtgcaaaagcacaatcaaaggtgctcagttctggtagatcatgtt
atatctgagtatcaaagaggggtcaatagttctcatatccataatgacagtgagagtgaa
ggagcgaaaatcttaaggattcttgagacatctgctgagccagaagtccttatggcagaa
atgagcccggagcaactaacttcctttgctacatataaatcaaaacttgaggctactagg
cagttagagatggagaaatcaattgagaaagctctggcggaggctggattaaatgagcga
gatgttgttccattcatgagggttagagttgttggattaattaataggaattatcatgga
aagggaagacctaaagaaggaataataaccatttggaatccaacagaaaagcaggaatgt
gagctggttgagggacaggcatatgtcgtttctggacttataccaatgaactcagattcg
gaaatcctttacttacaagcccgaggatctaccaacaaatggcagcccctatctcccctg
gcaatggaaagttttgaggcatttttctgcccacgaaagtcgatgaagttgtcaaattta
ggtgaaatttctctttccagtgagtttgacattgctgcatatgttgtgtatgtgggagaa
gtctatacagcttctcatcagaagaaacagtgggtgtttgtgacagatgattccatttcc
gatttacagtcagattctttacttgccatcagtttttgctcaccatccattgatgatgac
tcgtttgcaccaatcaaccctaacctagtgggatccatggtaggcttctgtaaccttatc
aagaaaccaaaggatcaaatgaatcatctctgggttgctgaagcaacagaaaattctaca
tattatttaaattttaaaccctcaatttctcacctccaaagtgccggcgcttctgttcag
gcatgggcaaaggcctctagctcgattattgacgaactccggaagaaggttttatttgta
attggcaattgtgaaggctag
DBGET
integrated database retrieval system
