Gossypium arboreum (tree cotton): 108458496
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Entry
108458496 CDS
T05776
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108458496
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gab04040
]
108458496
Ion channels [BR:
gab04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108458496
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Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
TMEMspv1-c74-12
IQ
DUF3382
Motif
Other DBs
NCBI-GeneID:
108458496
NCBI-ProteinID:
XP_017613403
UniProt:
A0A0B0MR02
A0ABR0Q7E0
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All DBs
Position
4:8722940..8726532
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AA seq
695 aa
AA seq
DB search
MPSLSNFSSWWTARSHLQISPAESSDNGSGDINEDNLIPNPIECYACTQVGLPVFHSTSC
DQAHPPEWEAYAGSSLVPIHARACLEKNSTLAATRQPSGPFGGRRGVLDPRSKRVQKWNR
SILLARAMALAIDPLFFYAVSIGRGGWPCLYMDSGLAVTVTVLRTCVDAVHLFHIWLQFR
LAYVSRESLVVGCGKLVWDSRVIASHYVRSVKGFWFDAFVILPVPQAVFWLVLPKLMREE
HIRHIMNILFLSFLFQFLPKVHHTICLMRRMKKVTGYVFGTIWWGFGLNLIAYFIASHVA
GGCWYVLTMQRITSCLRQQCARNEQCGKLSLSCGGGSTKVNGKPLCLDVEGPFNYGIYEW
ALPVVSSNSVAVKILYPIFWGLMTLSTFGNILEPTSNWLEVIFSICLVLAGLLLFTLLIG
NIQVFLHAVMAKKRQMQLRCRDMEWWMKRRQLPSCLRQRVRRFEHQKWATLGGEDEMELI
KDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVYSKDEKIFREGDPVQ
RMVFIVHGRIKRTQSFSKGMVATSIIEAGGFIGDELLSWCLRQSFIDRLPASSATFVSVE
SVEAFGLDSDHLRYITYHFKYKFASERLKRTARYYSSNWQTWAAVNIQLAWRRYRTRVKG
QNLIISRTEQGSSRDHQLLQYASMFMSIKLHDHQE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctctccaatttctccagctggtggactgcacgtagtcaccttcaaatatct
ccggccgagagctctgataatggcagcggcgacatcaacgaagacaacctgattcccaac
cccattgaatgctacgcttgcactcaagtgggactcccagttttccactccaccagctgc
gaccaagcacaccctccggaatgggaagcctacgccggctcttccctcgttcccattcac
gcccgagcttgcctggagaagaactcgactctagcagccactcggcagccttccggtccg
ttcggcggacgacgaggagtgcttgacccgaggagcaagcgggtacagaaatggaaccgt
tcaatcctgctggctcgtgcaatggccttagccattgatcctctcttcttttatgctgta
tctataggcagaggtggatggccttgtttgtacatggatagtgggcttgccgtgactgtt
accgtccttcggacttgtgtcgacgctgtgcatttgttccatatatggcttcagttcagg
ttggcgtacgtgtcgagggagtccctcgtcgtcggttgcgggaaactggtgtgggactct
cgtgtcattgcttctcattatgttcgttcggttaaaggtttctggtttgatgccttcgtg
attctcccagttcctcaggcagtgttctggttagttttaccaaaactaatgagggaagag
cacatcaggcatataatgaatatactgttcttgagtttcttgttccaattcctcccaaaa
gttcaccacaccatttgcttgatgagaaggatgaagaaggtcactggttatgtctttggc
accatttggtggggttttggccttaatctcattgcctacttcatagcttctcatgttgcg
ggagggtgttggtatgtgctcactatgcagcgcataacctcgtgtctcaggcaacaatgt
gcgagaaacgagcagtgcggaaaactgtctttgtcttgtggcggtggctcaacaaaagtt
aatggaaaacctttgtgcttagacgttgaaggaccattcaattatgggatttatgagtgg
gctcttcctgttgtttctagcaattctgttgctgttaagatcctttatcccatattttgg
ggcttaatgactctcagcaccttcggaaatattctagagccaacgagtaactggttagaa
gtgatattcagtatatgcttagtgctagctggattgctgctcttcactttactcataggg
aacatccaggttttcttgcatgctgtcatggcgaagaagagacaaatgcagctgagatgt
cgagacatggaatggtggatgaagcgtcggcagttaccgtcatgtttgagacaaagagtt
cgccgttttgaacaccagaaatgggccactttgggaggagaagatgaaatggaattgatc
aaagatttgcctgaaggccttcggcgggacattaagcgttatctttgccttgacctcatc
aaaaaggttcctttgttccacaacttggatgatcttattttggataacatttgtgaccga
gttaaacctcttgtctactctaaagatgaaaagatatttagagaaggagatccggtgcaa
agaatggtgtttatagttcatggacgcattaaacgtactcaaagcttcagcaaaggcatg
gttgcgacgagtataatcgaagcaggaggctttataggtgatgagctgctctcatggtgt
cttcgccaatcatttatcgaccgtcttccggcctcatctgctacattcgttagcgtcgaa
tcggttgaagcgtttggtcttgattcggaccatctccgatacatcacatatcatttcaag
tacaaattcgctagcgagaggcttaagagaacagcaagatattattcatcaaattggcaa
acatgggccgctgtgaacatacaactcgcctggcggcgttaccgaacgagggttaaaggt
cagaatctgattatttccaggacagagcagggaagcagcagagaccaccagttgctacaa
tatgcttcaatgttcatgtcaatcaaattacatgatcatcaagaataa
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