Gossypium arboreum (tree cotton): 108458765
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Entry
108458765 CDS
T05776
Name
(RefSeq) RING-H2 finger protein ATL78-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108458765
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108458765
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
108458765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-ANAPC11
FANCL_C
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
108458765
NCBI-ProteinID:
XP_017613652
LinkDB
All DBs
Position
4:complement(4581256..4582066)
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AA seq
185 aa
AA seq
DB search
MTSSTTSTHFPLELLDSFHPRKLLYHPAQEHKFSIINYFHANGSTVLLVLICAIVSSCGL
LCMAKCSFRGPSSVAAESGNRSTKSANVGVKQKALNAFPIVKYAIELSLDTTCAICLSEF
AAGEILRILPRCNHGFHILCIDTWLSSHSSCPTCRHCLLETDQKTNNCSQEVPVSMQETM
NIEVN
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgacaagctcaacaacatccacccatttccccctagagttgcttgatagcttccatcca
agaaaacttctttaccacccagctcaagaacacaagttttccatcattaactacttccat
gcaaatggatccactgttctcttagtcctcatttgcgccatcgtttcctcttgtgggttg
ctttgtatggccaagtgttcatttagaggcccaagttctgttgctgccgaatctggtaac
cgttcaaccaagtcagccaatgtaggagttaagcagaaagccttaaatgccttccctata
gtaaaatatgcaattgagttgagcctagacaccacttgtgccatatgcttgtccgagttt
gctgctggggagattctgcggatcttgccaaggtgcaatcatggatttcatattctatgt
atagatacatggcttagttcacattcttcatgccctacatgccggcactgcctgcttgaa
acggaccaaaagaccaataattgtagccaggaagtgcctgtgtcgatgcaggaaaccatg
aacatagaagtgaactag
DBGET
integrated database retrieval system
