Gossypium arboreum (tree cotton): 108458894
Help
Entry
108458894 CDS
T05776
Name
(RefSeq) phytoene synthase 2, chloroplastic-like
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00906
Carotenoid biosynthesis
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
Module
gab_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
108458894
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gab01006
]
108458894
Enzymes [BR:
gab01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
108458894
Prenyltransferases [BR:
gab01006
]
Terpene biosynthesis
Squalene/phytoene synthase
108458894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
108458894
NCBI-ProteinID:
XP_017613778
LinkDB
All DBs
Position
4:6029034..6032164
Genome browser
AA seq
365 aa
AA seq
DB search
MAAGGVVCVTFPKQNLIPPPRKRLGPKLRTGVPLISSTAVRAYSGKKVHEVVLKQAALVK
QQRPNEGCKDWDLLNEAYERCGEVCAEYAKTFYLGTLLMTSERRRAIWAIYVWCRRTDEL
VDGPNASHITPRALDTWEKRLDNIFQGRPYDLFDAALSHTVSNYALGIQPFKDMIEGMRL
DLLKTRYNNFDELYLYCYYVAGTVGLMSVPVMGIASESKASIETVYSAALALGIANQLTN
ILRDVGEDGRRGRIYLPQDELASAGISEDEIFRGQVSDKWKIFMKNQIKRARMYFDEAEK
GVAELKEASRWPVWASLLLYRQILDVIEENDYNNFTKRAYVGKAKKFASLPLAYGRAIMG
TSKFF
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggtggtgttgtttgcgtgacatttcccaaacagaatttgataccgccacca
aggaagagattgggtccgaaactcaggaccggcgtcccactgatctcatcgacggcggta
agagcatattcaggaaaaaaggtacatgaggtggtgttgaagcaagccgctttggttaaa
caacagaggccaaacgaaggatgcaaagattgggacctgttgaatgaagcttatgagagg
tgcggtgaagtctgtgctgagtatgccaagactttctacttgggtacattgcttatgaca
tcagaacgtcggagggctatttgggccatttacgtttggtgcagaaggacagatgagctg
gtagatggaccaaatgcttcacacattacaccaagggctcttgacacttgggagaaaaga
ttagataacatctttcaaggccgtccctatgacttgtttgatgctgctttatctcatact
gtctcaaactacgctcttggtattcagcccttcaaggacatgatagaagggatgagatta
gatttattgaaaaccagatataacaactttgatgaactctatctatactgctactatgtt
gctgggacggtcggactaatgagtgttccggtaatgggaatcgcatccgaatcaaaggca
tccatcgaaaccgtctacagtgctgcattagccctcggaatcgctaatcaacttactaat
atactccgagatgttggggaagatggtaggagaggaagaatatatcttccacaagatgaa
cttgcctcggcagggatatcggaagacgaaatatttcgaggacaagtgagcgataaatgg
aaaattttcatgaaaaatcaaataaaacgagcaagaatgtacttcgatgaggccgaaaaa
ggggttgcggagctaaaggaggcaagcagatggccagtgtgggcatcattgttgttgtat
agacaaatcttagatgtcatcgaagaaaatgactataataatttcaccaaaagggcttat
gtagggaaagcaaagaaatttgcttcacttccactggcttatggaagagcaattatgggc
acttccaaattcttctaa
DBGET
integrated database retrieval system
