Gossypium arboreum (tree cotton): 108459668
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Entry
108459668 CDS
T05776
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
gab04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108459668
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108459668
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gab01009
]
108459668
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108459668
03036 Chromosome and associated proteins [BR:
gab03036
]
108459668
Protein phosphatases and associated proteins [BR:
gab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108459668
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108459668
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108459668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
108459668
NCBI-ProteinID:
XP_052887060
LinkDB
All DBs
Position
7:complement(103488451..103495280)
Genome browser
AA seq
511 aa
AA seq
DB search
MINGGSETAVAPVGGSQPLDWKFSQVFGERTAGEEIQEVDIISAIEFNRNGDHLATGDRG
GRVVLFERTDTQDHVGHRRDLEKMDYPINRHPEFRYKTEFQSHEPEFDYLKSLEIEEKIN
KIRWCQSSNGALFLLSTNDKTIKLWKVQEKKVKKVCNMNVDSTKAMGNGPIVGSSISTSS
KQYIANGGCTSNDFSFPTGGFPSLHLPVVVTSHETNLMARCRRIYTHAHDYHINSISNNS
DGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSS
KGSIRLIDMRQSALCDTHSKLFEGQEAPGSRSFFTEIIASISDIKFAKDGRHILTRDYMT
LKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGNGLRVATGSYSNLFR
VFGCSEGSTEATTLEASKNPMRRQGQATSRPSRSLGNLSGVVRRVNGADNSGVDANGNAF
DFTSKLLHLAWHPTENSIACAASNSLYMYYA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacggcggttccgaaacagccgtggctccggtgggaggatcgcaaccgcttgac
tggaagttctctcaggtgttcggagaacggacggccggagaggaaattcaggaagttgat
atcatatctgcaattgaattcaatagaaatggcgatcaccttgctaccggtgatcgtggg
ggtcgggtggttttgtttgaaaggactgacactcaagaccatgttggacatcgaagagat
ctagagaagatggattatccaatcaataggcatcctgagtttcgctataaaacagagttt
cagagccacgaacctgagtttgactatctgaagagcttggaaattgaggagaaaattaac
aaaattaggtggtgccagtcatctaatggtgctctttttcttttgtcgacaaatgacaaa
acaatcaagttatggaaggtacaagagaagaaagtcaaaaaagtatgtaacatgaacgtg
gactcaaccaaagccatgggaaatggtcctattgttggttcaagtatatcaacaagctcc
aaacaatacattgcaaatggaggatgcacgagcaatgacttctcattcccaactgggggt
ttcccatctttgcatttgcctgtggtagtaaccagtcatgagacaaaccttatggccaga
tgtcgaagaatatatactcatgctcacgactatcatatcaattccatatccaataacagt
gatggtgaaacttttatttcggcagacgacctgcgaatcaatctttggaacctggaaatt
agcagccaaagttttaacattgttgatgtgaaacctgcaaacatggaggatttgactgag
gtgataacttcagcagaatttcatcctacacactgtaatatgttagcatatagtagttct
aagggctcaattcgtcttattgatatgcgacaatctgcattatgtgatactcacagcaaa
ttgtttgagggacaagaagctccaggttccaggtctttcttcacagagatcatagcatca
atctccgacattaagtttgccaaagatggaaggcatatactaactcgtgactatatgacc
cttaagttgtgggacataaatatggattcaggtccggttgcaactttccaggttcatgaa
tatcttagacctaagctttgtgatctgtatgaaaatgattccatctttgacaaatttgaa
tgttgcctaagtggaaatggacttcgagtggctactggttcctacagcaatctgtttcgg
gtgtttggttgttctgaaggtagtacggaagcaacaacactggaagccagcaaaaacccc
atgaggagacaaggtcaggcgacatcaaggccttcaagatctcttggtaatctctctggt
gttgtccgacgagtgaatggagcagataactcgggagttgatgcaaatggaaatgctttt
gatttcacttcgaagctgctacacttagcatggcatccaaccgagaactctattgcctgt
gctgcatccaacagtctttacatgtattatgcatga
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