Gossypium arboreum (tree cotton): 108459843
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Entry
108459843 CDS
T05776
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17-like
KO
K14487
auxin responsive GH3 gene family
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108459843
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Motif
Pfam:
GH3
GH3_M
GH3_C
CATSPERB_head
Motif
Other DBs
NCBI-GeneID:
108459843
NCBI-ProteinID:
XP_017614725
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All DBs
Position
5:complement(85678561..85682826)
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AA seq
594 aa
AA seq
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MEKSRIEYVLKKIEEQTSNAVEEQEKILENILKRNAETDYLNKFLHGQTDKQLFKKYVPL
VTYEDIKSYIDRVIDGEPPNILTTEPIIEFILSSGTSGGEPKYVLSTAECSQKRASIPML
MEAVIHKHIEGLDKGKGMYLLFSNPDFDTPSGLKARMFSSSYLSSPTFKTTVCKYVTTPI
EIILSLNKPQSMYCQLLIGLIRRHEVLRIGTIFASTFPNCIKFLQDHWKDICSNIRTGHL
SDWITEQDCRTPMSSFLLEPNSELADLLEPIFENESWEGIITKLWPKAKYIDAIVTGSMS
QYIGLIDYYSGRLPIISTFYNSSEACFGINMEPLNKPWDVSYTFLPNMAYFEFIPVDKES
PQKAQKLHFNGVSNEESIEKLENGNAQIVDLVDVKIGQYYEVVVTTLAGLYRYRVGDILK
VTGFHNKSPKFQFVERQNVALSIDRDKTSEADLSKAIKAAEIELEPRGFLLTAYSSFADT
WSIPGRYVLFWELKLRDSNTDQLKLDSNTMEQCCRRVEESLDFTYRLFRKMNLIGPLEIR
VVKFGAFDELMNFFVSRGAAPLQYKTPCCLKIKEAIEILDSRVVGKFFSNGNLA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaagtaggattgaatatgttttgaaaaaaatagaggaacaaacaagcaatgcc
gttgaagaacaagagaaaatattggagaacatattgaaacgaaatgctgaaactgattac
ttgaacaagtttctccatggccaaactgataagcaactcttcaaaaaatatgttcccctt
gttacttacgaagatatcaagtcttatatcgaccgggtcatcgacggggagcctccgaat
atccttactaccgaacccattatcgagttcatcctaagctcgggtacctcgggaggggag
ccgaagtatgtactttccactgctgaatgctcgcagaaaagggcttcaatccctatgttg
atggaagctgtgatccacaaacatattgagggtttagacaaaggcaaaggaatgtacctt
ttattcagtaacccagatttcgacactccatctggtttaaaagcaagaatgttctcatct
agctacttatcaagccccaccttcaaaaccactgtctgtaaatatgtcaccactccaatt
gaaatcatcctgtctttaaacaagccccaaagcatgtattgtcagttactcatcggccta
atccgacgacacgaggttctccgtatcggtactatcttcgcttcgacttttcccaattgc
atcaagttcttgcaagatcattggaaggacatttgctccaacatccgaaccggccatctc
agcgattggatcaccgaacaggattgtagaactcccatgtcgtcgttccttttagaacct
aattcggaattagccgatttactcgaaccgatattcgagaacgaatcgtgggaagggata
atcacgaaactttggcctaaagcaaagtatatcgatgccattgttacgggttcgatgagt
caatacattggtttaattgattattatagtggaaggttgcctataatttcaacgttttat
aattcttcagaagcatgttttgggatcaatatggaacctttaaacaagccttgggatgtt
tcctacacatttcttccaaatatggcttattttgagttcatccctgtggataaagagagc
ccacaaaaggctcaaaagcttcattttaatggcgtctctaatgaagaatccattgaaaag
ttggagaatggcaatgctcaaattgttgatcttgttgatgtgaagatcggtcagtattac
gaagttgtggtcacaactttggcaggtttatatcgatacagagttggagatattctaaag
gtaactggtttccacaacaaatctccgaaattccaatttgtggaacgacaaaacgtggct
ttgagcatcgacagggacaaaacaagtgaagccgatctcagcaaggctatcaaagctgcg
gaaatcgaacttgaaccccgcggttttcttttgacggcatacagtagctttgccgacaca
tggtccataccgggtcgatatgtactgttctgggagctaaagctgagagatagcaacact
gatcagctaaaactcgactctaatacgatggaacaatgctgccgtagagtcgaagaatcg
ctcgatttcacttacaggttgtttaggaagatgaatttgatcggaccgttggagatcagg
gtggtgaaattcggagcatttgatgaattgatgaatttctttgtatcgaggggtgctgca
cctctccaatacaagacaccttgttgccttaaaattaaggaagccattgaaatactggat
tccagggttgttgggaagttcttcagcaatggaaatcttgcatga
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