Gossypium arboreum (tree cotton): 108460110
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Entry
108460110 CDS
T05776
Name
(RefSeq) beta-xylosidase/alpha-L-arabinofuranosidase 2-like
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00520
Amino sugar and nucleotide sugar metabolism
gab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108460110
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
108460110
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GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
108460110
NCBI-ProteinID:
XP_017614968
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Position
4:complement(117176640..117182649)
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AA seq
776 aa
AA seq
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MISVFENRAPKVLFILGFFICFSLISVRVVGQVSQAVFACDATKDRKVVHYGFCNASLGR
DARVADLVRRLTLQEKILNIVNGAGNISRLGIPKYEWWSEALHGVSNIGPGTNFSSLVPG
ATSFPQVILTAASFNTSLFEAIGKVVSTEARAMYNVGLAGLTFWSPNVNIFRDPRWGRGQ
ETPGEDPLLSSKYGSSYVKGLQQPDDNADPSRLKVAACCKHYTAYDLDNWKGVDRYHFNA
VVTQQDMDDTFDPPFKSCVVDGDVASVMCSYNQVNGKPTCADPHLLAGVIRGQWKLNGYI
VSDCDSVEVFFDDQHYTKTPEQAAAKAILAGLDLNCGSFLGQHTAAAVKKGLLKESDIDN
AITNNFATLMRLGFFDGDPRKQPYGKLGPKDVCTAENQELARDAARQGIVLLKNTAGSLP
LSPAAIKTLAVIGPNANVTKTMIGNYEGIPCKYTTPLQGLTALVATKYLLGCSNVTCGNA
QVKEAKKLAATADATVLVMGIDQSLERESFDRVDLRLPGQQPLLIKEVAKVAKGPVILVI
MSGGGFDISFAKHNDKVTSILWVGYPGEAGGAAIADVIFGYYNPSGRLPMTWYPQSYLEK
VPMTNMNMRPDPSKGYPGRTYRFYTGETIYSFGHGLSYSKFSHKIVKAPQTVSIPLDNDH
VCRHSLDCNSVEAVEQLCKKSVTFDIHLRVQNKARHGGSHSVLLFVTPPSVHNSPRKHLI
GFEKISLKGKSGTLMRFKVDVCKDLSVVDELGRRKIALGQYVLHVGNFKHTLSLRI
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgatctctgtttttgaaaacagagcacctaaggtgcttttcattcttggtttttttatt
tgtttttcattgatctcggttcgagtcgtgggccaagtatcacaggctgttttcgcctgc
gatgctacaaaagaccggaaggtcgtgcattacggcttttgcaacgcgtcgttggggaga
gacgcgagggtggctgacttggtacgaaggctcacattgcaggagaaaattctgaacata
gtgaatggtgctgggaacattagtcggctcgggataccgaaatacgaatggtggtccgag
gctcttcacggggtctctaacatcggtcccggcaccaattttagcagcttggttccggga
gcgacaagctttcctcaagtcatcttgacagcggcttccttcaatacttctctcttcgaa
gccattggcaaggtggtctcgacggaggctcgagcaatgtacaatgttgggttggcaggg
ctaacattttggtcacccaacgttaacatattccgagacccgaggtggggaaggggccaa
gagacaccgggagaggacccattgctgagcagtaaatatggttcaagttatgtcaaaggt
ttgcaacaacccgatgataatgccgacccttctcgactcaaggtggccgcttgttgtaaa
cactacactgcctatgatttggataactggaaaggggtcgaccgctaccatttcaatgct
gtggtaacgcaacaagatatggatgatacatttgatccgccattcaagagctgcgttgtt
gatggggatgtggcgagtgttatgtgttcttacaatcaggttaatggtaagccaacttgt
gcagaccctcatcttcttgctggggtcattcgaggccaatggaaattaaatgggtacata
gtttcggattgtgactcggtggaagtgttcttcgatgaccagcactataccaagacacct
gaacaagctgctgccaaagcaattttggcagggttggatctcaactgtggatcattcctc
ggccaacacacagcagctgcagtgaagaaagggcttttgaaagaatcggacatcgataat
gccatcactaacaattttgctactttaatgagactcgggttcttcgacggtgatcctcga
aagcaaccttacggtaaacttggcccgaaagatgtgtgtactgcagagaatcaggagttg
gctcgtgatgctgcgaggcaagggattgtgttgctcaagaacactgctgggtcgttgcct
ctatcgcccgctgctatcaaaaccttggcagtaattggacccaatgccaatgtcaccaaa
acgatgatcggaaattacgaaggcattccatgcaaatacacaacaccattgcagggtcta
acagctttagtggcaacaaaatatctgcttggctgctccaatgtgacttgtggcaatgcc
caagtaaaggaagcaaagaaactagccgccacagccgacgccaccgtgcttgtgatgggc
attgaccaatccctcgaaagagaaagcttcgacagagttgaccttcgtttgccaggacag
caaccacttctcataaaagaagttgcaaaggttgccaagggacctgtgattcttgtaata
atgtcgggtggaggctttgatatatcgtttgccaaacacaatgacaaagttacaagcatc
ctttgggttggttaccctggtgaagctggtggagctgccattgctgatgtgatttttggg
tattataatccaagtggaaggcttccaatgacatggtatccccaatcatatctagagaag
gtcccaatgacaaacatgaacatgagaccagatccatccaaggggtacccgggaagaacc
tacagattctacactggggaaacgatttattcatttggacatgggctaagctactccaaa
ttcagccataaaatagttaaagcacctcaaactgtatccatccccttggacaacgaccac
gtttgtcgccactcgttggactgcaactcagtcgaggccgtcgaacaactttgtaaaaaa
agcgtaacgtttgacatacatttgcgagttcaaaacaaggcaaggcacgggggaagccac
tcggttttgttgttcgtcactcccccatcggtgcacaactcgcctcggaaacatttgatc
gggttcgagaaaatttctttgaaagggaaatcagggacattgatgagatttaaagtggat
gtctgcaaggatttgagtgtagttgatgaacttggaaggcgaaagattgctttgggacaa
tatgtgttgcatgtggggaacttcaaacacacattgagcttgaggatttga
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