Gossypium arboreum (tree cotton): 108460155
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Entry
108460155 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108460155
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gab03016
]
108460155
Enzymes [BR:
gab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
108460155
Transfer RNA biogenesis [BR:
gab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108460155
Prokaryotic type
108460155
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
108460155
NCBI-ProteinID:
XP_017615011
UniProt:
A0ABR0Q830
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Position
4:12745119..12749019
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AA seq
511 aa
AA seq
DB search
MSLHLLRPKILYFFTATGSSRLLSSKSCIFTNKLIFSKQPFSSFFFSTTSTPYPLQYDMI
INTPTQSQPTPTRRRLSKPDSPNSPEEEDPEKELGFDSWVQKKLTSEEEMDKSKRKYYKK
RRKRMYGSDSEDDDKGKNEDGFVELKPKVVEFDRLHEREEELYFYDTFAYPWEKDKHYKM
VYQLEKKFFPDQCFDKAFLEPGESNEKIKIKGKSKKTDDNNNKNNKVEDKGLVFFEEEEN
SGEDVKEKVIEKKVEEFFKCLKKVPNKETDDGEPYLVSRSTGLPPRWDGPYGTVILVNKP
KGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVERYQGMVKGYIGVF
RLGEATSTWDADSPVIQREPWEHIKDEDIKKAAASFCGEIWQVPPMFSAIKVGGERMYEK
ARKGETVELSPRRISIFHFDIERSLEDRQNLIFRVTCSKGTYIRSLCADFGKALGSCAHL
TALRRDSIGEYPAEDAWEFKELEEAITKGYF
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcatttgctacgtccaaagatcctatatttctttacagcaactgggtctagt
cgtctcttatcatcaaaatcctgtattttcaccaacaaattgatcttttcaaagcagcca
ttttcttcatttttcttctccacaacatcgactccttaccctcttcaatatgacatgatc
atcaacaccccgactcagtcccaacctaccccaactcgccgccgactcagtaaaccagac
tctcccaactcacctgaggaagaggacccagaaaaagaattgggttttgattcatgggta
caaaagaaactgacttcagaagaagaaatggataagtctaagaggaaatattataaaaag
agaaggaaaagaatgtatggttcagattctgaggatgatgataaggggaaaaatgaagat
gggtttgttgaattgaagcctaaagttgtggaatttgataggctacatgagagggaagaa
gagctctacttttatgatacatttgcctatccttgggaaaaggataaacattataaaatg
gtttatcaattggaaaagaagttttttcctgaccagtgttttgataaagcttttcttgag
cctggagaatcaaatgagaaaatcaaaattaagggaaaaagtaaaaagactgatgataat
aataataagaataataaggtggaggataaagggttggttttttttgaggaagaagaaaat
tcaggtgaggatgtgaaggagaaggttattgagaagaaggtggaggagtttttcaagtgt
ttgaagaaagttcccaataaagaaaccgacgatggggagccttaccttgttagtaggagt
actgggctccccccgagatgggatggtccatatgggacggtaattttggtgaataagccc
aaaggatggacctcatttaccgtttgtggcaagctgcgccgcttagtcaaagtgaaaaag
gtagggcacgctggaacacttgatcctatggcaactggtctattgattgtatgtgttggt
aaagccactaagttggtagagagataccaaggaatggtaaagggatacatcggagttttc
cgattaggggaggctacttcaacttgggatgctgattcaccggttattcaacgtgagcct
tgggagcatatcaaagacgaggacataaaaaaagctgctgcatccttctgcggagagata
tggcaagttcctccaatgttctctgccatcaaggttggtggtgaaaggatgtatgaaaaa
gcaagaaaaggggagaccgttgaactttcacccagacgaatttcaattttccactttgac
attgagcgtagcttagaagacagacagaacttgattttccgagtcacatgttcaaaagga
acatatatccgatcattatgtgcagattttgggaaggctttgggcagttgtgctcatttg
acggctctgcgaagagattcaattggggaatatccagcggaggatgcatgggagttcaag
gaactagaagaagcaatcactaaaggttatttctag
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