Gossypium arboreum (tree cotton): 108460192
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Entry
108460192 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108460192 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108460192
Membrane trafficking [BR:
gab04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
108460192
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_C
Ig_TPPC8_2nd
SNAP
Ig_TRAPPC9-Trs120_4th
TRAPPC13_C
Ig_TRAPPC9-Trs120_1st
CFAP70_TPR_C
Motif
Other DBs
NCBI-GeneID:
108460192
NCBI-ProteinID:
XP_017615072
LinkDB
All DBs
Position
4:complement(41178792..41203914)
Genome browser
AA seq
1283 aa
AA seq
DB search
MVDPANTPLGKMLLEEITPVVMVLCTPLVEESCLKNGLSFVQMLSPFCDFTNIDVPVRTA
IDQPYRLHKFKFRLFYASDIWQPNLEVAKERLKQVITKAGEDDFPEISSDLPQVNDLLSR
HESEILPTWFQFFNKELVRTLSFSDHEAFDHPVACLLVVSSRDEEPINRFLDLFNTNKLP
SLLNDGAMDPKILKHYLLVHDNQDGASEKATKLLTKMRSTFGPNDCRLLCINSSQDGQTR
HKDTPWATFRYDALATEHLGHFLKLDDLNEIKNLMQELSSKHIIPYMEQKIRLLNQQVSS
TRKGFRNQFKNLWWRKGKEDALDTTNGPVYTCSSIESQIRVLGDYAFMLRDYELAVSSYR
LISTDYKLDKAWKRYAGVQEMIGLTYFMLDQSRKEAEYCMEIAFNTYLKLGSPVQQNATR
CGFWWIEMLKTRNQIKEAATVYFRICGEDLLHSAVMLEQASFCYLLSKPPMLHKYGFHLV
LSGDHYKKCDQIKHAIRTYRNAVSVYRGTTWNLIKDRVHFHIGQWYASLGMYDVAVTHML
EILASSHQSKTSQELFLRDFLHIVQKTGKMFEVLKLQLPVINISTLKVIFEDHRTYASPA
AASIKEGVWCSLEEDMIPSLSAKSNWLDVQSKRIPRKYKESNICVAGEAIIVDIEFKNPL
QIPISILSVSLICELSANPEELNSEANSSNVEPQNDEYKTSTSTGDINSSLVLSEVDFSL
EGGETILVQLTVTPRVEGILTIVGVKWKLSSSVVGLHNFESNSVNKRIAKGRKAKHSPSA
DLKFVVIKSLPRLQGFIPSLPEKTYAGELRYLVLELNNQSKFPVKNLKMKISNPRFLNAG
NQSYLNVEFPACLEKKLNVEQSGGHGNAKKMLQNVFHFPEDISVQEETSLSWPLWFHAAV
PGHVSLYITVYYELENVSSIMKFRTLRMHYNLQVLPSLDVSFELSPCPSRLEEFLLRMDV
VNKTSSECFQIHQLSSVGQQWDFSLLQPVDSILPSQSLFAGQALSCFFMLKYHRKSSTSE
DSNPLFLQSDVRFGPPGNSEALFDVCSSPLADFHGYERLYQGMSCQGNVDFVFITQLRRG
NIDSGAPHRPLLFSHHVCHCSLYSFSSISWFVDGPQTIQHNFSASPCGVNLKMTINNSSD
AASFVHIKTFDPCSSNSQSIDATASQSGLPLENQAGWFSIPAVNDTKVITTDALAKRITN
SVSLESAPQFIWTGSSSTKVKLQPRATAEIPLQICVFAPGIYDLSNYALNWNLAPIEESQ
GEANKSSGECQGYPYYLTVLQST
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggtggatccggcgaatactccgcttggaaagatgctgttggaggagatcactccggtg
gttatggtgctttgcactccactcgtagaagaatcttgccttaagaacggcctctccttt
gtccaaatgctctcccctttctgcgacttcaccaacatcgatgtgcctgttcggacggcg
attgatcaaccctacaggttgcacaagttcaaatttaggttgttttacgcctcggatatt
tggcaacccaatctcgaggtagcaaaggagagactaaagcaagttattactaaggcggga
gaggacgatttccctgaaatatcttcagatctacctcaagtgaatgatcttctctcaagg
catgagtctgaaattttaccgacatggtttcagtttttcaataaagagcttgtacgtacc
ttgtctttttctgatcatgaagcttttgatcatcctgtggcatgccttttggttgtttct
tcaagggatgaggaacccataaatagatttttagacctctttaacaccaacaaattgccc
tcccttctcaatgatggtgcaatggacccaaagattttgaagcattacttacttgtgcat
gataatcaagatggtgcttcagagaaggctactaaacttttgactaagatgagaagtaca
tttggcccaaatgactgtcgattactttgcattaattcttctcaagatgggcagactcgt
cataaagataccccttgggctacttttagatatgatgctttagctactgaacatcttggt
cacttcctcaaactagatgaccttaatgaaattaagaatctcatgcaagaattatcatct
aaacacatcattccttacatggaacaaaagatacgtttgttgaaccaacaggtttcttct
acaaggaaaggttttagaaaccaatttaaaaacttatggtggaggaaggggaaggaagat
gcattggacaccacaaatggtcctgtgtatacctgtagctcaattgaatctcagattaga
gttttgggtgactatgcattcatgttacgagactatgagcttgccgtctccagctatcgc
ctaatttccactgattacaagcttgataaagcctggaagcgctatgctggtgtgcaggag
atgatcgggcttacatacttcatgcttgatcaatcaagaaaagaagcagagtattgcatg
gaaattgcatttaatacctatttaaagcttgggtctcctgttcaacaaaatgctacgaga
tgtggtttttggtggatagagatgctgaagacaagaaatcagattaaagaagctgccact
gtttatttccgcatttgtggtgaggatcttttacattcggctgtgatgctcgagcaagct
tctttttgctacttgttgtcaaaaccaccaatgctgcataaatatgggtttcatcttgtt
ctctctggtgatcactataaaaaatgtgatcagattaaacatgcgatacgcacatatagg
aatgctgtttctgtttacagaggaaccacatggaaccttattaaagatcgtgttcatttc
cacattggacagtggtatgcttctcttggcatgtatgatgttgcagtcactcatatgctg
gagatcttggccagcagtcatcaatcaaagacatcacaggagctatttctgagagatttt
cttcatattgttcagaaaactggaaaaatgtttgaggtgttgaaacttcagttacctgtt
atcaacatttccacacttaaggtcatttttgaagatcatcgaacttatgcatctcctgcg
gctgcaagcatcaaagaaggtgtatggtgttcactggaggaggatatgatcccatcattg
tctgccaagtccaactggctggatgtgcaatcaaagcgtattccgagaaaatataaagaa
tccaatatttgtgtggcaggagaagcaataatagtggatattgaatttaaaaaccctctg
caaatccctatttccatcttaagtgtttcattgatatgcgagctttctgcaaatcctgaa
gaattgaactctgaggcaaatagttcaaacgtcgagccccagaatgatgaatacaaaaca
tcaacttccactggggatattaattcatctttggttttatcggaggttgacttttcactg
gaagggggtgaaacaatcttggtgcaactaaccgttacaccaagagtagaaggcattctg
acaattgttggtgttaaatggaaattgtcaagttcagtagtaggcttgcataattttgag
tctaactctgtgaacaaaagaattgccaagggaaggaaagccaagcattcgcccagcgct
gacttgaagtttgtagtgattaagagtctacccaggcttcagggttttattccttcttta
ccagaaaaaacatatgcgggagagttgcgatatcttgtgttggagttaaataaccaatca
aaatttcctgtcaagaatctaaagatgaagatcagcaacccgagatttctaaatgctggg
aatcagagttatttaaatgtagaatttcctgcttgcttagaaaagaagttgaatgtcgag
caaagcggtgggcatggtaatgctaagaaaatgttgcagaatgtgttccattttcctgag
gacatatcagtgcaggaggaaacatcattatcttggcctctttggtttcatgctgctgtt
cctggccatgtttctttgtacattactgtatattatgaattggaaaatgtatcaagcatt
atgaaattccgcactctacgtatgcattataatttgcaggttttaccatcgttggatgta
tcatttgaacttagtccttgtccatcaagattggaagagttcctcttgcgtatggatgtt
gtcaacaagaccagttctgaatgtttccagattcatcagttgtcttctgttgggcagcag
tgggatttctcattgctccaacctgttgatagcattttaccgtctcaatccttatttgct
ggtcaagcattgtcatgcttcttcatgcttaagtatcacaggaagtcatcaacttctgaa
gacagtaatcctcttttcctccagagtgatgtaagattcggacctccgggaaacagtgaa
gccctcttcgatgtatgttcttcacctttggctgatttccacggttatgagagattgtac
cagggaatgtcatgtcaggggaatgttgatttcgttttcatcactcaactgcggaggggt
aatattgattctggtgctcctcatagaccacttctcttttcccatcatgtttgtcattgc
agtctttatagcttcagttcaatatcttggtttgtggatgggcctcagaccatacaacat
aacttctcagcttctccatgtggagtaaatttgaagatgactataaacaattcatccgat
gctgcttcatttgtccatatcaagacctttgatccctgcagtagtaacagccaatcaatc
gatgctactgcatctcaatcaggtctccctctggaaaatcaagcagggtggttcagcatt
ccagcagtgaatgacacgaaagtcatcacaaccgatgctcttgcaaaacgtattacgaac
tcagtttccctggaaagtgccccccagttcatttggacaggttcaagctctactaaagtc
aaacttcaacctagggcgacagctgaaattcctcttcagatctgtgttttcgctcctgga
atatacgatttatcaaactatgctttgaattggaatctagcacccattgaagaaagtcaa
ggagaagcaaacaagtcttcgggagagtgccaaggatatccctattatcttacggtgctg
caatctacttaa
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integrated database retrieval system
