Gossypium arboreum (tree cotton): 108460199
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Entry
108460199 CDS
T05776
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04142
Lysosome
gab04144
Endocytosis
gab05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108460199
04142 Lysosome
108460199
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108460199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108460199
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108460199
Membrane trafficking [BR:
gab04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
108460199
Exosome [BR:
gab04147
]
Exosomal proteins
Proteins found in most exosomes
108460199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Motif
Other DBs
NCBI-GeneID:
108460199
NCBI-ProteinID:
XP_017615088
LinkDB
All DBs
Position
4:18203630..18214785
Genome browser
AA seq
1701 aa
AA seq
DB search
MAAANAPIAMKEVLTLPSIGISPQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQVVFWKWI
SPKLLGLVTLTSVYHWSIEGDSEPVKMFERTANLVNNQIINYKCDPSEKWLVLIGIAPGA
PEKPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSILISFATKSFNAGQITS
KLHVIELGAQPGKPSFSKKQADLFFPPDFQDDFPVAMQISHKYGLIFVITKLGLLFVYDL
ETASAVYRNRISPDPIFLTSEASAAGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFTHYDRPRIAQLCEKAGLFVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSATVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIGASEDADVYSDLVRYLLMVRQKVKEPKVDSELIYAYAKTDRLGEI
EEFILMPNVANLQNVGDRLFDEALYEAAKIIFAFISNWAKLAVTLVRLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRAEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTVMNHSPEAWDHMQFKDIIVKVASVELYYKAVHFYLQEHPDLINDMLNVL
VLRVDHTRVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDSLYKDAMETASQSGD
RELAEELLVYFIEQGKNECFAACLFVCYDLIRPDVALEMAWVNNMIDFTFPFLLQFIREY
TGKVDELIKDKIEAQKDVKAKEQEEKEVIAQQNMYAQLLPLALPAPPMPGMGGGFAPPPP
MGGGMGMPPMPPYGMPQMGSY
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaaacgctcccatcgccatgaaggaggtcttaactttgccaagcattggc
attagtcctcaatttatcacattcacgaacgtaactatggaatctgataagtatatttgt
gtgagagaaaccgcgccgcaaaacagtgttgtgattatcgatatgaacatgccgatgcag
ccgttgagacggcctattacagcggactccgctcttatgaatccgaattctagaatcctt
gctttgaaagctcaactaccaggaacaactcaagatcatttgcaaatatttaacatagag
atgaaagcaaaaatgaaatcccatcagatgcctgaacaggttgtattttggaaatggatt
agcccaaaattgcttggcctggtaacactgacctctgtgtatcattggtcaattgaaggt
gattctgagccagttaagatgtttgagagaacagctaatttagtgaacaatcagatcata
aactataagtgtgatccttcggagaagtggttggttttgatcggaattgcccctggtgca
cctgagaagccacaattggttaaggggaacatgcaacttttctctgttgatcagcagcgt
agtcaagctcttgaagcacatgctgcttcattcgctcagtttaaggttccaggaaatgag
aatccttctattcttatttcatttgccactaagagttttaatgccggtcagattacatca
aagttgcatgtaattgagcttggtgcccagccaggtaagccgtcgttttcaaagaaacaa
gcagatctattcttcccgccagattttcaagatgattttccagttgcaatgcagatatcc
cacaaatatggtttgatctttgttattaccaagcttgggctgctgtttgtttatgattta
gagacagcatctgctgtatacagaaacaggatcagtccagatccaatatttttaacatct
gaagcttctgctgctggagggttttatgccataaataggcgaggtcaggtgttgttggca
actgtaaatgaagcaacaatagtgccatttgttagcggtcaattgaacaatttggagctt
gccgtcaatctggctaaaagaggaaaccttccgggtgcagagaacttggttgtccaacgt
tttcaagaattgtttgctcagacaaagtataaagaagctgctgagcttgctgcagagtct
ccacaagggatacttcgcacacctgatacagttgccaagtttcagagtgtccctgtgcaa
gctgggcagactccgccgctgttgcagtactttggtacccttttaacaagaggaaaactc
aatgcatttgagtcattggaattatctcggcttgtggttaaccaaaacaagaagaacctt
ctggagaattggttggctgaagataaattggaatgtagtgaggaacttggagaccttgtg
aagactgtggataatgatcttgcgctgaaaatatatattaaagctagggcaactccgaaa
gttgttgcagcttttgctgaacgtagggagtttgacaagatcttgatttactcaaagcag
gttgggtacactcctgactacttgttccttctgcaaacaattctccgtacagatccacag
ggagctgttaactttgcattgatgatgtctcaaatggagggaggttgtccagttgattac
aacaccatcactgatctttttcttcagaggaatttgatacgggaggctactgcatttcta
ttagatgttttgaagccaaatctgccagagcatgcttttctacaaactaaggtcttggaa
atcaatctagtaacttttccaaatgtagctgatgccatcttagcaaatggaatgttcact
cactacgatcgtccccgaattgcacaactatgtgaaaaagctggtctctttgtgcgagct
cttcagcattacactgagttgcccgatattaaacgtgtcatcgtgaatacacatgctata
gagccacagtcacttgttgaattttttggaacactttcacgagaatgggctttggagtgc
atgaaggaccttttgttggttaatctaagaggcaatcttcaaataatcgttcaggttgcc
aaagagtactgtgagcagttgggtgttgatgcttgcataaaactttttgagcaatttaag
tcatatgaaggattgtactttttcctgggctcctatttgagctcaagtgaggatcctgat
atacacttcaagtacattgaggcagctgctaaaactggtcaaatcaaggaggttgagcgt
gtaaccagggaatcaaatttttatgatgctgagaagacaaagaacttcctaatggaggcc
aagcttcctgatgcaaggcccctaattaatgtttgtgatcgatttgggtttgttcctgat
ctcactcactacctctacacaaataacatgctccggtacattgaagggtatgttcagaag
gtgaacccagggaatgctcctttggtagtggggcaattgctagatgatgaatgccctgaa
gattttataaagggtctcattctctcagtccgttctctgcttccagttgagccccttgtg
gaggaatgtgagaaaagaaatcgccttcgtttgcttacacagtttttggagcatcttgtg
agtgagggaagccaagatgtgcatgttcacaatgctctgggaaaaatcatcattgacagc
aataacaatccagagcacttcctcacaaccaatccttactatgattctagggtggttggt
aagtactgtgagaagcgtgatcccactctggcagttgtggcttacagaagaggacaatgt
gatgatgaacttatcaatgtcactaataagaactcattattcaaattgcaggctaggtat
gttgttgagagaatggatggtgatctttgggagaaggttctaaatcctgaaaatgaatat
agaagacagctaattgatcaggttgtgtcaactgctttgccagaaagcaagagtccagaa
caagtttctgcaactgttaaagctttcatgacagctgacctgccccatgaactgattgag
cttcttgagaagattgtgctccaaaactctgcattcagtgggaacttcaatctgcaaaat
ctacttattttgacagctattaaggcagatccatctagagtcatggattatatcaatagg
ctagataattttgatggacctgcagttggagaagtggctgtggaagcccaactatatgaa
gaagcttttgcgattttcaaaaagttcaacttaaatgttcaggctgtcaatgttttattg
gataacattagaagcattgatcgggcagtggaatttgcatttagagtcgaagaagatgct
gtttggagtcaggtggcaaaggcacaactgagggaggggctggttagtgatgcaattgaa
tcgtttattcgtgcagatgatgctactcagttccttgatgttatcggagcttctgaggat
gcagatgtctactctgatctggtgaggtatcttctgatggttaggcagaaggtcaaggag
cccaaggtggacagtgaactcatttacgcctatgctaagactgatagactgggagaaatt
gaagaattcattctcatgccaaacgttgctaatcttcaaaatgttggtgatcgcttgttt
gatgaagccctatatgaggccgcaaaaataatatttgcttttatatcgaactgggccaag
ttggctgttacactggtgaggcttaaacaattccagggtgctgttgatgcagcacgaaaa
gcaaacagtgccaagacatggaaagaggtttgctttgcttgtgttgatgcagaggaattc
cgattggcacagatatgtggtctgaacgttattatacaggtggatgacttggaagaagtc
agtgaatactatcagaatagaggatgcttcaatgagttaatctctctcatggagagtggt
ttaggattggaacgtgcacacatggggatctttactgagttgggagttctgtatgccaga
tatcgtgcagagaagcttatggagcacattaagttgttctctactcgtctcaatattccc
aagctgataagagcatgtgatgagcagcagcactggaaggaacttacctacttatatatc
caatatgatgagtttgataatgctgcaactactgtgatgaaccactctcctgaggcatgg
gatcatatgcagttcaaagatatcatagtcaaagttgctagtgttgagctatattacaag
gctgtccacttttacttgcaagagcatcctgatctcatcaatgatatgctaaatgtgctt
gtgcttcgtgtggatcatactcgtgttgttgacattatgagaaaggcgggtcatctgcgt
ctggtgaagccatatatggttgctgttcagagcaacaatgtatcagcagtaaatgaagcg
ttgaatgagatttatgtagaggaagaagattatgatagattgagagaatctattgacttg
catgataactttgatcagattggccttgctcaaaagattgagaaacatgagctacttgag
atgagacgtgttgccgcatacatatacaaaaaggcgggcagatggaagcagtccattgcc
ttgtcaaagaaagacagcctttacaaagatgctatggaaactgcttcacagtctggtgat
cgtgaacttgctgaggagttgcttgtttacttcattgagcagggcaagaatgaatgtttt
gcggcatgcctctttgtctgttatgacttaattcgaccagatgttgctcttgaaatggcc
tgggttaacaatatgatagacttcacattcccgttcctgttgcagtttatccgtgaatat
accggcaaagttgatgaacttatcaaggataagatcgaggctcaaaaggacgtaaaggct
aaagagcaagaagagaaggaggtcattgcacaacagaacatgtatgcgcagttgctacct
cttgccttgccagcacctccaatgccaggaatgggaggaggttttgctcctccaccacct
atggggggaggaatgggaatgcctccgatgccaccatacggtatgccacaaatgggcagc
tattaa
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