KEGG   Gossypium arboreum (tree cotton): 108460199
Entry
108460199         CDS       T05776                                 
Name
(RefSeq) clathrin heavy chain 1-like
  KO
K04646  clathrin heavy chain
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab04142  Lysosome
gab04144  Endocytosis
gab05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:gab00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108460199
   04142 Lysosome
    108460199
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    108460199
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gab04131]
    108460199
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gab04147]
    108460199
Membrane trafficking [BR:gab04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    108460199
Exosome [BR:gab04147]
 Exosomal proteins
  Proteins found in most exosomes
   108460199
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link
Other DBs
NCBI-GeneID: 108460199
NCBI-ProteinID: XP_017615088
LinkDB
Position
4:18203630..18214785
AA seq 1701 aa
MAAANAPIAMKEVLTLPSIGISPQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQVVFWKWI
SPKLLGLVTLTSVYHWSIEGDSEPVKMFERTANLVNNQIINYKCDPSEKWLVLIGIAPGA
PEKPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSILISFATKSFNAGQITS
KLHVIELGAQPGKPSFSKKQADLFFPPDFQDDFPVAMQISHKYGLIFVITKLGLLFVYDL
ETASAVYRNRISPDPIFLTSEASAAGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFTHYDRPRIAQLCEKAGLFVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSATVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIGASEDADVYSDLVRYLLMVRQKVKEPKVDSELIYAYAKTDRLGEI
EEFILMPNVANLQNVGDRLFDEALYEAAKIIFAFISNWAKLAVTLVRLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRAEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTVMNHSPEAWDHMQFKDIIVKVASVELYYKAVHFYLQEHPDLINDMLNVL
VLRVDHTRVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDSLYKDAMETASQSGD
RELAEELLVYFIEQGKNECFAACLFVCYDLIRPDVALEMAWVNNMIDFTFPFLLQFIREY
TGKVDELIKDKIEAQKDVKAKEQEEKEVIAQQNMYAQLLPLALPAPPMPGMGGGFAPPPP
MGGGMGMPPMPPYGMPQMGSY
NT seq 5106 nt   +upstreamnt  +downstreamnt
atggcggccgcaaacgctcccatcgccatgaaggaggtcttaactttgccaagcattggc
attagtcctcaatttatcacattcacgaacgtaactatggaatctgataagtatatttgt
gtgagagaaaccgcgccgcaaaacagtgttgtgattatcgatatgaacatgccgatgcag
ccgttgagacggcctattacagcggactccgctcttatgaatccgaattctagaatcctt
gctttgaaagctcaactaccaggaacaactcaagatcatttgcaaatatttaacatagag
atgaaagcaaaaatgaaatcccatcagatgcctgaacaggttgtattttggaaatggatt
agcccaaaattgcttggcctggtaacactgacctctgtgtatcattggtcaattgaaggt
gattctgagccagttaagatgtttgagagaacagctaatttagtgaacaatcagatcata
aactataagtgtgatccttcggagaagtggttggttttgatcggaattgcccctggtgca
cctgagaagccacaattggttaaggggaacatgcaacttttctctgttgatcagcagcgt
agtcaagctcttgaagcacatgctgcttcattcgctcagtttaaggttccaggaaatgag
aatccttctattcttatttcatttgccactaagagttttaatgccggtcagattacatca
aagttgcatgtaattgagcttggtgcccagccaggtaagccgtcgttttcaaagaaacaa
gcagatctattcttcccgccagattttcaagatgattttccagttgcaatgcagatatcc
cacaaatatggtttgatctttgttattaccaagcttgggctgctgtttgtttatgattta
gagacagcatctgctgtatacagaaacaggatcagtccagatccaatatttttaacatct
gaagcttctgctgctggagggttttatgccataaataggcgaggtcaggtgttgttggca
actgtaaatgaagcaacaatagtgccatttgttagcggtcaattgaacaatttggagctt
gccgtcaatctggctaaaagaggaaaccttccgggtgcagagaacttggttgtccaacgt
tttcaagaattgtttgctcagacaaagtataaagaagctgctgagcttgctgcagagtct
ccacaagggatacttcgcacacctgatacagttgccaagtttcagagtgtccctgtgcaa
gctgggcagactccgccgctgttgcagtactttggtacccttttaacaagaggaaaactc
aatgcatttgagtcattggaattatctcggcttgtggttaaccaaaacaagaagaacctt
ctggagaattggttggctgaagataaattggaatgtagtgaggaacttggagaccttgtg
aagactgtggataatgatcttgcgctgaaaatatatattaaagctagggcaactccgaaa
gttgttgcagcttttgctgaacgtagggagtttgacaagatcttgatttactcaaagcag
gttgggtacactcctgactacttgttccttctgcaaacaattctccgtacagatccacag
ggagctgttaactttgcattgatgatgtctcaaatggagggaggttgtccagttgattac
aacaccatcactgatctttttcttcagaggaatttgatacgggaggctactgcatttcta
ttagatgttttgaagccaaatctgccagagcatgcttttctacaaactaaggtcttggaa
atcaatctagtaacttttccaaatgtagctgatgccatcttagcaaatggaatgttcact
cactacgatcgtccccgaattgcacaactatgtgaaaaagctggtctctttgtgcgagct
cttcagcattacactgagttgcccgatattaaacgtgtcatcgtgaatacacatgctata
gagccacagtcacttgttgaattttttggaacactttcacgagaatgggctttggagtgc
atgaaggaccttttgttggttaatctaagaggcaatcttcaaataatcgttcaggttgcc
aaagagtactgtgagcagttgggtgttgatgcttgcataaaactttttgagcaatttaag
tcatatgaaggattgtactttttcctgggctcctatttgagctcaagtgaggatcctgat
atacacttcaagtacattgaggcagctgctaaaactggtcaaatcaaggaggttgagcgt
gtaaccagggaatcaaatttttatgatgctgagaagacaaagaacttcctaatggaggcc
aagcttcctgatgcaaggcccctaattaatgtttgtgatcgatttgggtttgttcctgat
ctcactcactacctctacacaaataacatgctccggtacattgaagggtatgttcagaag
gtgaacccagggaatgctcctttggtagtggggcaattgctagatgatgaatgccctgaa
gattttataaagggtctcattctctcagtccgttctctgcttccagttgagccccttgtg
gaggaatgtgagaaaagaaatcgccttcgtttgcttacacagtttttggagcatcttgtg
agtgagggaagccaagatgtgcatgttcacaatgctctgggaaaaatcatcattgacagc
aataacaatccagagcacttcctcacaaccaatccttactatgattctagggtggttggt
aagtactgtgagaagcgtgatcccactctggcagttgtggcttacagaagaggacaatgt
gatgatgaacttatcaatgtcactaataagaactcattattcaaattgcaggctaggtat
gttgttgagagaatggatggtgatctttgggagaaggttctaaatcctgaaaatgaatat
agaagacagctaattgatcaggttgtgtcaactgctttgccagaaagcaagagtccagaa
caagtttctgcaactgttaaagctttcatgacagctgacctgccccatgaactgattgag
cttcttgagaagattgtgctccaaaactctgcattcagtgggaacttcaatctgcaaaat
ctacttattttgacagctattaaggcagatccatctagagtcatggattatatcaatagg
ctagataattttgatggacctgcagttggagaagtggctgtggaagcccaactatatgaa
gaagcttttgcgattttcaaaaagttcaacttaaatgttcaggctgtcaatgttttattg
gataacattagaagcattgatcgggcagtggaatttgcatttagagtcgaagaagatgct
gtttggagtcaggtggcaaaggcacaactgagggaggggctggttagtgatgcaattgaa
tcgtttattcgtgcagatgatgctactcagttccttgatgttatcggagcttctgaggat
gcagatgtctactctgatctggtgaggtatcttctgatggttaggcagaaggtcaaggag
cccaaggtggacagtgaactcatttacgcctatgctaagactgatagactgggagaaatt
gaagaattcattctcatgccaaacgttgctaatcttcaaaatgttggtgatcgcttgttt
gatgaagccctatatgaggccgcaaaaataatatttgcttttatatcgaactgggccaag
ttggctgttacactggtgaggcttaaacaattccagggtgctgttgatgcagcacgaaaa
gcaaacagtgccaagacatggaaagaggtttgctttgcttgtgttgatgcagaggaattc
cgattggcacagatatgtggtctgaacgttattatacaggtggatgacttggaagaagtc
agtgaatactatcagaatagaggatgcttcaatgagttaatctctctcatggagagtggt
ttaggattggaacgtgcacacatggggatctttactgagttgggagttctgtatgccaga
tatcgtgcagagaagcttatggagcacattaagttgttctctactcgtctcaatattccc
aagctgataagagcatgtgatgagcagcagcactggaaggaacttacctacttatatatc
caatatgatgagtttgataatgctgcaactactgtgatgaaccactctcctgaggcatgg
gatcatatgcagttcaaagatatcatagtcaaagttgctagtgttgagctatattacaag
gctgtccacttttacttgcaagagcatcctgatctcatcaatgatatgctaaatgtgctt
gtgcttcgtgtggatcatactcgtgttgttgacattatgagaaaggcgggtcatctgcgt
ctggtgaagccatatatggttgctgttcagagcaacaatgtatcagcagtaaatgaagcg
ttgaatgagatttatgtagaggaagaagattatgatagattgagagaatctattgacttg
catgataactttgatcagattggccttgctcaaaagattgagaaacatgagctacttgag
atgagacgtgttgccgcatacatatacaaaaaggcgggcagatggaagcagtccattgcc
ttgtcaaagaaagacagcctttacaaagatgctatggaaactgcttcacagtctggtgat
cgtgaacttgctgaggagttgcttgtttacttcattgagcagggcaagaatgaatgtttt
gcggcatgcctctttgtctgttatgacttaattcgaccagatgttgctcttgaaatggcc
tgggttaacaatatgatagacttcacattcccgttcctgttgcagtttatccgtgaatat
accggcaaagttgatgaacttatcaaggataagatcgaggctcaaaaggacgtaaaggct
aaagagcaagaagagaaggaggtcattgcacaacagaacatgtatgcgcagttgctacct
cttgccttgccagcacctccaatgccaggaatgggaggaggttttgctcctccaccacct
atggggggaggaatgggaatgcctccgatgccaccatacggtatgccacaaatgggcagc
tattaa

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