Gossypium arboreum (tree cotton): 108460298
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Entry
108460298 CDS
T05776
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase KEG
KO
K16279
E3 ubiquitin-protein ligase KEG [EC:
2.7.11.1
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gab01001
]
108460298
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108460298
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108460298
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108460298
Protein kinases [BR:
gab01001
]
Serine/threonine kinases: TKL group
RIPK family [OT]
108460298
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108460298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_15
Ank_2
Ank
Ank_4
Pkinase
Ank_5
PK_Tyr_Ser-Thr
Ank_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_11
RING_XB3-XBAT31
Prok-RING_4
zf-rbx1
zf-RING_4
DUF7015
Motif
Other DBs
NCBI-GeneID:
108460298
NCBI-ProteinID:
XP_052882869
LinkDB
All DBs
Position
4:complement(2503978..2517887)
Genome browser
AA seq
1654 aa
AA seq
DB search
MKVPCCSVCQTRYNEEERVPLLLQCGHGFCKECLSRMFSASSDTSLPCPXCRHVSLVGNS
VLALKKNYGILALLNSNPNSAGSNSRNDFDCDYTDDEGDDDDEGREDDDENGDFFHELTG
GRINRGSHASSSGGAAAGCGPVIELTAHPEVKLVRKIREREGKGGRAGVETWAAVISGAY
GGGGGRRCKHKVAVKKVGAMEGMDGEWVQGQLDSLRRASMWCRNVCTFHGVIKLEESSLG
IVMDRCHGSIQSAMFNNEGRLTLEQVLRYGADIARGVAELHAAGVVCMNIKPSNLLLDAN
GHAVVSDYGLASILKNPACRKARAECDSSKIHSCMDCTMLSPHYTAPEAWEPVKSLNLFW
EDAIGISVESDAWSFGCTLVEMCTGSIPWAGLSADEIYRAVVKSRKLPPQYASVVGVGLP
RELWKMIGDCLQFKPSKRPTFNAMLAIFLRHLQEIPRSPPASPDNGFAKFPGSNVVEPPA
VADLEVVPDNPNLLHRLISEGDVSGVRDFLANASSGNSGTSISSLLEAENADGQTALHLA
CRRGSAELVEAILEYAEANVDVLDKDGDPPLVFALAAGSPECVLALIRRGSDVQSRLREG
FGPSVAHVCAYYGQPDCMRELLLAGADPNAVDDEGESVLHRAVAKKYTDCALVILENGGC
ASMAVLNSKNLTPLHLCVATWNVAVVKRWVEVASPEEIAEAIDIPSPVGTALCMAAALKK
DHEIEGRELVRLLLAAGADPTAQDGQHGRTALHTAAMANDVELVKIILDAGVDVNIRNVH
NTTPLHVALARGATSCVGLLLSAGADCNLQGDEGDNAFHIAADTAKMIRENLEWLIVMLR
NPDAAVEVRNHSGKTLRDFLETLPXEWISEDLMEALMNRGXHLSPTLFEVGDWVKFRRRI
TTPTYGWQGARHKSVGFVQNVVDRDNLIVSFCSGDGNARVLVNEVVKVIPLDRGQHVKLR
ADVKEPRFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVEEFKVGDWV
RIRPTLTTAKHGLGSVTPGSIGIVYCIRPDSSLLLDLSYLPNPWHCEPEEVEPVSPFRVY
KRLCVKRSVAEPRYAWGGETHHSVGRISEIETDGLLIIEIPNRPIPWQADPSDMEKLEDF
KVGDWVRVKASVPSPKYGWEDITRNSIGIIHSLEDDGDIGIAFCFRSKPFCCSVTDVEKV
PPFEVGQEVHVMPSVSQPRLGWSNETPATVGKIVRIDMDGALNVRVSGRHSLWKLXPGDA
ERLSGFEVGDWVRSKPSLGTRPSYDWNTIGKENLAVVHSIQDTGYLELACCFRKGKWSTH
FSDVEKVPSYKVGQHVRFRAGLVEPRWGWRGTQSDSRGIITSVHADGEVRVAFFALPGMW
RGDPXDFDIEPMFGVGEWVQLRENASCWKSIGPGSVGVVQGIGYEGDEWDGSTLVAFCGE
QERWMGPTSHLEKVDRLVIGQKVRVKLSVKQPRFGWSGHSHTSVGTIAAIDADGKLRIYT
PVGSKTWMLDPSEVELIEEQELCIGDWVRVRPSISVPTHHWGEVTHSSIGVVHRMENGDL
WVAFCFTERLWLCKACEMERVRPFKVGDKVRIREGLVTPRWGWGMETHASKGQVVGVDAN
GKLRIKFQWREGRPWIGDPADIVLDDSFGITSTS
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaccttgttgttcagtttgccaaacgcgttataacgaggaagagagagttcct
ttattgcttcaatgcggccatgggttttgcaaagagtgtctttccagaatgttttctgct
tcatccgatacttccttgccctgccccnggtgccgccacgtgtcccttgtcggtaactct
gtgctggctctgaagaagaactatgggattttagctctccttaactcgaacccgaactcg
gctgggtccaactccaggaacgatttcgattgcgattacacggatgatgaaggagatgat
gatgatgaaggaagagaggatgatgatgaaaatggggatttcttccatgaattgacaggt
ggtcggattaaccgcgggtctcatgcttcgagttccggaggtgctgccgctggatgcgga
ccggtgattgaactgacagctcatccggaagtgaagttggttaggaagataagggaaagg
gaagggaaaggagggagagcaggagtggaaacctgggcggcggtaattagtggggcctat
ggaggcggaggaggaaggcggtgtaagcataaggtggcggtgaagaaagtaggggcaatg
gaaggcatggatggagaatgggttcaaggtcaacttgatagtttgaggcgtgcatcaatg
tggtgtaggaatgtttgtactttccatggagttattaagttggaagagagtagtttgggg
attgttatggataggtgtcatggatcgattcaatctgcaatgttcaacaatgaagggaga
cttactttggagcaagttctaagatatggagcagatattgcacgaggggtggcagaactt
catgctgcaggtgtcgtttgtatgaatataaaaccatccaatcttcttctggatgcaaat
ggtcatgctgttgtttctgattatggacttgcttcaattctgaagaatcctgcttgccga
aaagcacgggcagaatgtgattcctccaagattcattcctgcatggattgcactatgctc
agcccacattacactgctccagaggcttgggagccagtaaaaagtctcaatctgttctgg
gaggatgcaataggcatatcagtagaatcagatgcctggagttttggttgtacattggtg
gaaatgtgtactggttccatcccttgggctggtttaagtgcagatgaaatctatcgagct
gttgttaagtctcggaaactgcctccacaatatgctagtgtagtgggcgttgggttacct
agggaattgtggaagatgattggtgattgcctgcagttcaagccatcaaaaagacccaca
tttaatgcaatgttagcaatattcctccgtcatttgcaagagataccacgcagccctcct
gcaagccctgataatggctttgccaaattccctggatcaaatgtagtggagccaccagct
gtggctgacttagaggttgtacctgataatcctaaccttctacatcgacttatttccgag
ggagatgtgagcggtgtgagagattttcttgcaaatgcttcatcaggaaatagtggcacc
tcaatttcgtcacttttagaagcagagaatgctgatggacaaactgctctccacttggcc
tgcaggcgaggtagtgctgaacttgttgaggcaatattggagtatgcagaggcaaatgtg
gatgttttggataaggacggggatcctcctcttgtctttgctttagctgctggatcccca
gaatgtgtccttgcccttattaggagaggctctgatgttcaatccaggttaagggaaggc
tttggtccttctgttgcccatgtttgtgcatactatggtcaacctgactgcatgcgtgag
ttgctattggctggagctgaccctaatgctgtagatgatgaaggcgaatctgttctacat
agagctgtggccaagaaatatacagactgcgcccttgtcatattggaaaatggaggctgt
gcatcaatggctgtcttgaattccaaaaacctgacaccattgcatttgtgtgtggcaaca
tggaatgtggctgttgtcaaaaggtgggtggaagttgcatcaccagaagaaattgctgag
gcgattgatattcccagtcctgttggcactgctttgtgcatggctgctgctcttaagaaa
gaccacgaaatagagggtagggaactggtgcgcttattgcttgcagctggggcagatccc
actgcccaagatggtcaacatgggagaacagcattgcatactgctgctatggctaatgat
gttgaattggtaaaaataattcttgatgctggagtggatgtgaacatcagaaatgtgcac
aatacgacacctctacatgtagctttggccagaggggcaacatcatgtgttggactgctt
ttatctgctggagcagattgtaatttgcagggtgatgaaggcgataatgctttccatata
gcagcagatactgcaaaaatgattcgtgaaaatcttgaatggctcattgtgatgctgaga
aatcctgatgctgctgttgaagttagaaatcacagtggcaagacgttacgtgactttttg
gagacacttcccngtgaatggatttctgaagatctaatggaggcactaatgaataggggg
nttcatctgtctcctacattatttgaagtgggtgattgggtgaagttccgaagaagaatc
actacacctacatatgggtggcaaggtgcaaggcataaaagtgttgggtttgtgcaaaat
gtggtggacagagacaatcttatcgtgtccttttgttctggagatggaaatgctcgtgta
ttggtaaatgaagttgtaaaagtgattcctctggatagagggcagcatgttaagcttaga
gcagatgtcaaagagccaaggtttggttggcgtggtcaatcacgtgacagtattggaact
gttttatgtgttgatgatgatgggattttacgtgttggctttcctggagcttctagagga
tggaaagctgatcctgcagaaatggaaagagttgaagaattcaaggttggggattgggtt
cgtattcgtccaactcttacaacggcaaagcatggattgggatctgtcacacctgggagc
attggcatagtatactgtattagaccggacagtagtttattgttggacttgagctatctt
ccaaatccttggcattgtgaaccagaggaagttgagcctgtttctccgttcagggtatat
aagagactgtgtgtgaagcggtctgttgcagaaccaagatatgcttggggtggtgagacc
catcatagtgtaggaagaattagtgaaatagagactgatgggcttcttataattgagatt
cctaatcgacccatcccatggcaggctgatccctctgacatggaaaaacttgaggatttc
aaggttggggattgggttagagtaaaagcctcagtaccctccccaaaatatggatgggag
gacattacgcgtaacagcatcggtataattcatagtttagaggatgatggtgatattggt
attgcattctgcttcagaagcaagcctttttgttgttctgtcactgatgtggagaaagtc
cctccttttgaagtgggccaagaggttcatgtgatgccatcagtcagtcagcctcgactt
ggatggtcaaatgaaactccagcaactgttggaaaaattgttagaattgacatggatgga
gcattgaatgtgagggtgtctggcaggcatagtttgtggaaacttntcccgggggatgca
gaaaggctttcaggatttgaagtgggtgattgggtccgttcgaagccaagccttggcact
agaccaagttatgattggaataccattgggaaggagaatttagctgtagtgcatagtatt
caggatactggatatttggaattggcatgctgcttccggaaagggaagtggagtacccat
ttctcagatgtagaaaaggttccaagctataaagttgggcaacatgttcggtttcgagct
gggttagttgagccaaggtggggctggagagggactcaatctgattcacggggcattatt
actagtgttcatgcagatggggaagtgagagttgctttctttgctttgccaggcatgtgg
agaggagatcccnnagattttgatattgagccgatgtttggagtgggagagtgggtgcaa
ttgagagaaaatgctagctgttggaaatctattggacctggtagtgtcggtgttgtacaa
ggaatagggtatgaaggagatgaatgggatggaagcacccttgttgcattttgtggcgag
caggagagatggatgggacccacttcccatcttgagaaagtggacagacttgtcataggg
cagaaggtgagagtaaagctctcggtgaagcagccaagatttggctggtcaggtcatagc
catacaagtgttggaacaatagcagcaattgatgccgatggcaagttgagaatatacact
cctgttggctccaaaacttggatgcttgacccatcagaagtggagctgattgaggaacag
gaactttgcatcggggactgggttagggttaggccatcaatttcagtcccgactcaccac
tggggagaggtaactcactcgagcatcggggtagtgcatcgaatggaaaatggggactta
tgggtggcattctgctttacggaaaggctatggctttgtaaggcttgtgagatggaaagg
gtcaggccatttaaagttggcgacaaggtgcggattcgagaggggcttgtaacgccaagg
tggggatggggaatggagactcatgctagcaaaggtcaggtagttggggttgatgcaaat
ggaaaactaaggattaagtttcaatggagggaagggaggccatggattggagatccagca
gacattgtacttgatgacagttttggcataaccagcacctcatga
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integrated database retrieval system
