Gossypium arboreum (tree cotton): 108460299
Help
Entry
108460299 CDS
T05776
Name
(RefSeq) probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
108460299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108460299
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
108460299
Membrane trafficking [BR:
gab04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
108460299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
AlgF
Motif
Other DBs
NCBI-GeneID:
108460299
NCBI-ProteinID:
XP_017615235
LinkDB
All DBs
Position
4:21828102..21842182
Genome browser
AA seq
1025 aa
AA seq
DB search
MRTVELIGVVLFLGVLCSESKYMVYNTSAGIDAGKINVHLVPHTHDDVGWLKTVDQYYVG
SNNSIQGACVQNVLDSLVPALLADKNRKFIYVEQAFFQRWWNDQSELTQSIVKKLVNSGQ
LEFINGGMCMHDEAVPHYIDMIDQTTLGHRFLKEEFGVTPRIGWQIDPFGHSAVQAYLLG
AEVGFDSFFFGRIDYQDRIKRKKEKSLEVIWRGSKSLGSSAQIFAGAFPENYEPPPGFYF
EVNADSPVVQDNVNLFDYNVQDRVNDFVAAAIAQANITRTNHIMWTMGTDFRYQYAYTWY
RNMDKLIHYVNKDGRVNALYSTPSIYTDAKYATSKSWPLKIEDYFPYADRANAYWTGYFT
SRPALKFYVRKMSGYYLAARQLEFFKGRNDSGPNTDSLADAMAIAQHHDAVTGTEKQHVA
NDYAKRLSIGYTEAEKVVASSLACLTDSMSSFGCGDPTTNFQQCPLLNITYCPASETDLS
HGKNLIVLVYNSLGWKREDVIRFPVVNEDVTVHDSEGRKIESQLVPIVDAYVDLRKYYAR
AYLGSSPDDVPKYWIAFTVSVPPLGFSTYTISASKKPGAGSTKSSIYKFQKGEKPAIEVG
EGNLTLTISAPSGKIINYVNNRNLVEESVEQSFSYYTGYNGVNDKAPQNSGAYVFRPNGT
YHIKAEQASLTVIQGPLINEVHQQINPWIFQTTRLYKEKEHVEVEFIVGPVPIHDGFGKE
VATQITTSLENSKTFYTDSNGRDFIKRIRDFRTDWDLEVNQPVAGNYYPINLGIYIRDSK
KEFSVLVDRSLGGSSIVDGQIELMLHRRLLLDDSRGVDEALNETVCVLDDCRGLAVQGKY
YYRIDPLGEGAKWRRSFGQEIYSPLLLAFAEEDGENWMSSHTPTFSAIDASYSLPDNVAL
ITLQELDDGKVLLRLAHLYEVGEDSDLSVMSKVELKKLFPGKKIAKVRELSLSANQEREE
MEKRRLVWKVEGETENQNENPKVVRGAPVDPKKLEVDLAPMEIRTFVMEFEVDLMSTTFK
RIVDA
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccgttgagttgatcggcgtggtgctatttttgggggttttatgttctgaatcg
aaatacatggtttataacacttcagctggaatagatgctgggaaaatcaatgttcatttg
gttcctcacacccatgatgatgttggttggttaaaaaccgttgatcagtattatgttggc
tctaacaattccatccagggagcttgtgtgcagaatgtgttggattctttagtgccggca
ctgttagctgacaaaaatcgcaagttcatttatgttgagcaggcattttttcagcgatgg
tggaatgatcagagtgagctaactcagagtatagtcaagaaacttgtcaactcgggtcaa
ctggagttcataaacggaggcatgtgcatgcatgatgaggcagtaccacattacatagac
atgattgatcaaacaactcttggacatcgattcctaaaagaggagtttggtgtcactcca
agaattggatggcaaattgatccttttggacattctgcagtacaggcttacttattgggt
gcggaggtgggattcgactcatttttctttggccgcatagactaccaagacaggattaag
cgaaaaaaagagaagagtctcgaagtaatttggcggggttctaagagcctgggctcatct
gctcagatttttgcaggagcattcccagaaaattatgaacctccaccaggtttctacttt
gaagttaatgctgattcccctgttgttcaagataatgtcaatttgtttgattacaatgtc
caagacagagtgaatgactttgttgccgcggcaatagcacaggcaaacataactagaaca
aatcacataatgtggaccatgggaacagattttaggtatcagtatgcatacacttggtac
cggaacatggacaagcttattcattatgtgaataaggatggacgcgtcaatgctctctat
tctactccatccatatatactgatgccaaatatgctacaagtaaatcttggcctctcaaa
attgaggactactttccttacgcagatcgtgcaaatgcttactggacaggatactttaca
agtagaccagctttaaaattctatgttagaaaaatgagtggctactatctggcagcaagg
caacttgaatttttcaaagggaggaatgattcagggccaaatacggactcactggcagat
gctatggctattgctcaacatcatgatgctgttacaggtaccgagaagcagcatgtggcc
aatgattatgcaaaaaggctatcaataggctacacagaggctgagaaggttgttgcatct
tcacttgcttgcttaactgattcgatgtcatcctttggatgtggtgacccaaccaccaat
ttccagcagtgtccacttctgaatatcacttactgtcctgcatcagaaactgacctgtct
catgggaagaacttgattgttttggtctacaattctttgggatggaaaagagaggatgta
atacgttttcctgttgttaatgaagatgttactgttcatgattccgaggggagaaaaatt
gaatcacagcttgttccaatagttgatgcctatgtggacctaaggaagtattatgctagg
gcatatttaggtagcagcccagatgatgtacctaagtattggattgcatttacggtatct
gtaccacctcttggcttcagcacttacaccatctctgcctctaaaaagccaggagctgga
tcaaccaaatcatctatatacaaatttcagaagggtgagaaaccagctattgaagttggt
gaaggaaatttaacgcttactatttcagctccttcagggaagatcataaattatgtcaac
aacagaaacttggttgaggaatcagtggaacaatcatttagctattacactggatataat
ggagttaacgacaaagcaccccagaactctggggcatatgtcttccgtccaaatggcaca
taccacataaaagctgaacaggcctcattgactgttattcaaggaccattgataaatgag
gtgcatcagcagatcaatccgtggatatttcagactactagactttacaaggagaaggag
catgttgaagttgagttcattgttgggcctgtgccaattcatgatggatttggaaaagaa
gtagcaactcagataacaacttctctggaaaacagcaaaacattctacactgattctaat
ggacgtgattttattaaacggattcgtgattttaggacagactgggacctggaagtaaac
caaccagttgctggaaattattacccaattaatttaggaatttacattcgtgatagtaag
aaagaattttcagtcctggtagatcgatctctaggaggatctagcatagtggatggtcaa
atagagttgatgctccacaggaggctgctccttgatgactctagaggtgttgatgaggct
ctaaatgaaacagtctgcgttcttgatgattgcagaggactagctgtccaaggaaaatat
tattacagaattgacccacttggagagggtgctaagtggcgtcgttcttttggccaagag
atatactcacccctcctcttagcatttgcagaagaggatggagagaactggatgagttct
cacacacccacattttctgcaattgatgcctcctatagtttacctgataatgttgcactt
ataactcttcaggagcttgatgatggaaaagtcctccttaggttggcacatttatacgag
gttggagaggacagtgatctttctgtaatgagtaaagtggaactgaagaagctgtttcca
ggcaagaagatagcgaaggtgagagagttgagcttatctgcgaatcaagaaagagaagaa
atggagaagaggaggcttgtttggaaagtagaaggagaaactgaaaatcaaaatgaaaat
cccaaggtggtgagaggtgcaccagttgatccaaaaaaattggaggtggatcttgctccg
atggaaattcgcacctttgtcatggaatttgaagttgatctgatgtctactactttcaag
agaatagttgatgcataa
DBGET
integrated database retrieval system
