Gossypium arboreum (tree cotton): 108460309
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Entry
108460309 CDS
T05776
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gab03032
]
108460309
03400 DNA repair and recombination proteins [BR:
gab03400
]
108460309
Enzymes [BR:
gab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
108460309
DNA replication proteins [BR:
gab03032
]
Prokaryotic type
DNA Topoisomerases
108460309
DNA repair and recombination proteins [BR:
gab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
108460309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
alpha-hel2
Motif
Other DBs
NCBI-GeneID:
108460309
NCBI-ProteinID:
XP_052882906
LinkDB
All DBs
Position
4:2819547..2839343
Genome browser
AA seq
961 aa
AA seq
DB search
MNSLSSSPTPSISPSMSLSATLRVSSFLRHNLFLAPSRASALRRNVSHLRFLSSSPSRRT
VHHPVKARRGGGQEDDSGPGNGSLMAVVKDGTGDGRDGRVLPFELHKEAMDSYMAYALSV
LLGRALPDVRDGLKPVHRRILYAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDS
MVRMAQDFSLRFPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAILLADLEQDTVDFVP
NFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDVLCALIRNPEASLQE
LLEYMPGPDFPTGGLIMGNLGILAAYRTGRGRIVVRGKADIELLDSKTKRSAVIIKEVPY
QTNKSLLVEKIAELVESKTLEGINDIRDESDRSGMRVVIELKRGADPSIVLNNLYRLTAL
QSSFNCNMVGILDGQPKQMGLKELLQAFLEFRCSVVERRARYKLSQAQDRRHIVEGIVVG
LDNLDRVIDIIKDAKGNAAASAGLKEEFNLSDKQADAVLDISLRRLNLLERKKFVDESAS
LMEQISKLTELLSSQKNILQLIEQEALELKNKFSSPRRSILDDSDGGLLEDIDIIPNEEM
LLAFSEKGYVKRMKPSTFNLQNRGTIGKSVGKLRVNDAMSDFIVCRSHDHVLYFSDRGIV
YSAYAYKIPESSRTAAGTPLIQIISLSEGERITSIVPVSEFAEDQFLVMLTVNGYIKKVS
LNYFSAIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSSCDIIRALSRNTR
GAIAMRLKEGDKMASMDIIPAPRHTDLDKTAEDSISYDKGGSGPWLLFISENGYGKRVPL
SSFKQSPLNRVGLIGYKFSSEDRLVAVFVVGFSLTEDGESDEQVVLVSQSGTVNRIKVRD
ISIQSRYARGVILMRLEHAGKIQSASLISASAEEAAELLPGMQSEEATTNAGTAEGISMA
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaattccttatcttcttctcccactccctcaatctcaccttcaatgtctctctccgct
acactccgcgtctcttctttcctacgccacaacctcttcctcgccccttctcgcgcctcc
gccctccgtcgtaatgtctcccacctccgtttcctctcatcgtccccttctcgtcgtacc
gtacaccatcccgtcaaagcaaggcgcggcggggggcaggaggacgacagtggaccagga
aatggaagcttgatggccgttgtcaaagatggaaccggcgatggccgagatgggcgggtt
cttcccttcgagcttcacaaggaggctatggactcatatatggcttacgcattatccgtg
ttgcttggacgggctttgcccgatgttagagatggtttgaagccggtgcataggagaatc
ctgtacgcaatgcatgaattaggtctttcgtctagaaaaccattcaagaaatgtgctaga
gttgttggtgaggtcctcggtaagtttcatcctcatggggataatgcagtatatgattcc
atggtgcggatggcacaggatttttcattgaggttcccgcttatccaaggacatggaaat
tttggttcaattgatgctgatcctcctgctgccatgcgttacactgagtgcagacttgaa
gcactcacagaagcaattcttctggcagatctggaacaagatacggttgattttgttccg
aactttgataattcacaaaaagaaccatcacttctgcctgctagactaccaacattgttg
ctgaatgggtcctctgggattgcggttggcatggcaactaacattcctcctcacaatctc
ggagagttggtagatgtgctctgtgcattaattcgtaatccagaggcctcattacaagag
ttgttggaatacatgcctggacctgactttccaactggagggctgataatgggaaacctt
gggatcttggcagcatatcgaactgggcgaggacgtattgtagttagaggaaaggctgac
attgaactgcttgactctaagaccaagagaagtgcagttattattaaagaggttccttat
cagacaaacaaatccttgcttgttgagaagattgctgaacttgttgagagtaagactcta
gagggtatcaatgatattcgtgatgagagtgatcgctctggaatgcgtgtggtcattgag
cttaaaaggggagctgacccatctattgtgctgaataacctttaccgtctcactgctctt
cagtctagtttcaactgcaatatggtgggtattcttgatggacagccaaagcagatgggc
ctgaaagagttgcttcaggcatttttagaatttagatgctctgttgttgagagacgtgcg
aggtacaagctttcacaagcacaagatagaaggcatattgtggagggtattgtggtaggg
cttgataatttggatagagtaattgatataatcaaagatgctaagggcaatgcagctgca
tcagctggcctgaaggaggaattcaatctttctgacaagcaagcagatgccgtattggat
ataagcttacgacgacttaaccttcttgagcgaaaaaagtttgttgatgaaagtgcatca
ttgatggaacaaatttcaaagttaacagaactgttatcaagccaaaaaaatatattgcag
ctaatagaacaagaagcacttgagctaaagaacaagttttcgagtccaagacgttcaata
ctggatgattcagatggtggcctacttgaagacatagatattattccaaatgaagaaatg
ctgctggcatttagcgaaaaaggttatgttaaacggatgaagccgagcacttttaatctt
caaaaccgtggaacaattggtaaatctgttggaaaacttcgtgtaaatgatgcaatgtct
gacttcatagtttgccgttcacatgaccatgtgctgtatttcagtgataggggaatagtg
tactcagcttatgcatataaaattccagaaagtagccggactgctgctgggacgcccctg
atccagatcatatctttatctgaaggcgagagaataacgtcaattgttcctgtcagtgag
tttgcggaagaccagtttctagtgatgcttacagtgaatggctacatcaagaaagtatcc
ctaaattacttctcagctattcggtccactggaatcatagccattcaattggttcctggt
gatgagttaaagtgggttcgttgttgcacaaatgatgaccttgtggccatggcttcacaa
aatggaatggtcattctaagttcctgtgacattatccgagcactaagcagaaacaccaga
ggagctattgccatgagactgaaagaaggagataagatggcaagcatggacatcatacca
gctccaaggcatacagatttggataagacagcagaagattccattagctatgataagggt
ggcagtggtccgtggctcttgtttatctctgagaatggctatggaaagcgagttcctttg
agtagcttcaaacagtcgcctttgaacagagttggtttaataggatacaagttctcttca
gaggatcgcttggtagctgtctttgtggttggcttttcattgacagaagatggtgaaagt
gacgagcaagtggtgctagtcagccaaagtggtactgttaatagaattaaagttcgggat
atctcaatacagtctcgttatgcaaggggggttattctaatgcgactagagcatgccgga
aagattcaatcagcatcactaatctcagcctcagcagaagaagcagcagagttgctaccc
ggtatgcaatcagaagaagcaacaactaatgcaggaacagctgagggcatatctatggca
tcataa
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