Gossypium arboreum (tree cotton): 108460325
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Entry
108460325 CDS
T05776
Name
(RefSeq) zinc finger protein JACKDAW-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108460325
Transcription factors [BR:
gab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108460325
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
108460325
NCBI-ProteinID:
XP_017615263
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Position
4:complement(100359779..100362669)
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AA seq
465 aa
AA seq
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MSGDGFSLPVSIGGFVHQEQNNTNPNPKSNPVKKKRNLPGNPDPDAEVIALSPKTLMATN
RFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRNNKEPVKKKVYICPEKTCVHHDPSRAL
GDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSF
ITHRAFCDALAEESARFSSVAGAATNLNFRNDVVNLPIGFGGIPQFGSGFTQDVSGMTVS
GLPEMVQMASGNLFGSSSLNNFGTDSNPPLLPLPQGLNEEGGSKGKLMESLSPLYSDTQN
EQSKPAAPMSATALLQKAAQMGSTRSKPTSFFGNSFCVMSSTSSQRSASLRSTQNRNDQL
QQIYPNVKQQESNLMASSSVSMSAYAGLGTSNNFDRLILQTGVKQNAPNQLKMHPGSNSI
DQSLTRDFLGMGNDQSARPFLPQELAKFVSIGSTMGLNQFSSSNH
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgatgggttttctttacctgtttcaataggagggtttgttcatcaagaacaa
aataatacaaaccctaaccctaaatccaatcccgttaagaagaagagaaatcttccagga
aatccagatccagatgctgaagttattgctctatctcccaaaactctcatggctaccaac
agattcatatgtgaaatatgcaacaaaggtttccaacgagaccaaaacttgcagcttcat
cgaaggggtcacaatcttccatggaagctgaagcaaagaaacaacaaagaaccagttaag
aagaaggtatacatttgccccgagaaaacctgcgtccaccatgatccatcgagagcactc
ggtgacctcactgggataaagaagcatttcagcagaaaacatggagaaaagaagtggaag
tgtgagaaatgttcgaagaaatacgccgttcaatccgactggaaagctcactccaaaact
tgtggtactagggagtacaagtgtgactgtgggacactgttttccagaaaagacagcttt
atcacacatagagctttctgtgacgccttagctgaagagagtgcaagattcagttccgtt
gctggtgcagccacaaatctaaatttcagaaacgatgttgtgaatctgcctattggattt
ggtggaattcctcagtttggttccggttttacacaagatgtcagtgggatgactgtatca
ggtctgcctgagatggtccaaatggcttcaggcaatctatttggttcatcttcactgaac
aattttggtacagattccaatcctcctctattgccattgccacaaggtctaaacgaagaa
ggtggaagcaaaggcaagttgatggaaagcttgtcgcctctctactcggatactcaaaac
gagcaatccaagcctgctgcaccaatgtctgcaactgcgctcttgcaaaaagcagcccag
atgggttcaacaagaagcaaaccgacgtccttctttgggaacagtttttgtgtaatgagc
tcaacttcttctcaaaggtcagctagtttgagatcgactcaaaatagaaacgatcagctg
cagcaaatatacccaaatgtgaagcaacaagagagtaatttaatggcgtcaagtagtgta
tcaatgagtgcttatgcaggtctcggaacaagcaacaactttgataggctcatcttacaa
acaggagtgaaacaaaatgccccaaatcaattaaagatgcaccctggttcaaactcaatt
gaccagagcttaactagggatttccttggcatgggcaatgatcagtctgctcgtccattt
ttaccccaggaactagctaaatttgtatcaattggttcaaccatgggtctgaatcaattc
agcagcagcaaccactaa
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