Gossypium arboreum (tree cotton): 108460403
Help
Entry
108460403 CDS
T05776
Name
(RefSeq) ABC transporter B family member 20 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108460403
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108460403
04147 Exosome [BR:
gab04147
]
108460403
04090 CD molecules [BR:
gab04090
]
108460403
Enzymes [BR:
gab01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108460403
Transporters [BR:
gab02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108460403
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108460403
CD molecules [BR:
gab04090
]
Proteins
108460403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_15
AAA_21
Zeta_toxin
HTH_psq
Motif
Other DBs
NCBI-GeneID:
108460403
NCBI-ProteinID:
XP_017615377
LinkDB
All DBs
Position
4:14283797..14292104
Genome browser
AA seq
1407 aa
AA seq
DB search
MMVSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDTTAEAAGEAAQVEAEEEMEEEEEI
EPPPAAVPFSGLFACADRLDWVLMIVGSLAAAAHGTALVVYLHYFAKIIQVLGLGPQEQG
QDRMDEQFERFKELSLTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDM
SFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFGGLIIGFVNCWQIALITL
ATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYAT
SLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTNHKAHGGEIIAALFAVI
LSGLGLNQAATNFYSFDQGRIAAFRLFEMISRSSSGLNQEGNILASIQGNIEFRNVYFSY
LSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNL
KLEWLRSQIGLVTQEPALLSLSIKDNIAYGRDATFDQIEEAAKIARAHTFISSLERGYET
QVGRAGLALTEEQKIKLSIARAVLLNPTVLLLDEVTGGLDFEAERTVQEALDLLMLGRST
IIIARQLCLIRNVDYIAVMEEGQLVEMGTHDELVALDGLYAELLRCEEAAKLPRRMPVRN
YKETSTFQIEKDSSSVHSFQESSSPKFVKSPSLQRVHGIFRPQDGAFNTQESPKAHSPPP
EKMLENGLPVDAGDKEPSIRRQDSFERRLPELPKLDVQSAQQQKSNDSDPESPVSPLLTS
DPKNERSHSQTFSRPLSYSDDIPIEVKEAKDVHHGEAPSFWRLAQLSFAEWLYAVLGSIG
AAIFGSFNPLLAYVIALIVTAYYRRQEHHHLQDEVDRWCLIIACMGIVTVVANFLQHFYF
GIMGEKMTERVRRMMFSAMLRNEIGWFDNEENSPDNLSMRLANDATFVRAAFSNRLSIFI
QDSAAVIVAILIGMLLHWRLALVAFATLPVLAVSAFAQKLWLAGFSKGIQEMHRKASLVL
EDAVRNIYTVVAFCAGNKVMDLYRLQLKKILKQSFFHGMAIGFAFGFSQFLLFACNALLL
WYTALSVKRRYIDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLTSVFEIIDRVPK
IEPDENSALKPPNVYGSIELKNVDFCYPTRPEMLVLSNFSLKVNGGQTVAIVGVSRSGKS
TIISLIERFYDPVAGQILLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHN
ASESEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLL
DEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMKHVDNIVVLNGGRIVEEGTHD
SLLAKNGLYVRLTQPHFGKGLRQHRLV
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgatggtatcaagaggtttatttgggtggtcaccaccccacatacaacctttgacacca
gtctcggaggtttcggagccgccggaatcgccgtctccgtacttggatacaacagcggaa
gctgctggtgaagcggcacaggtggaggcggaggaagagatggaagaggaagaagagatc
gaaccgccccctgccgctgtgcccttctctggattgtttgcctgtgctgacaggcttgat
tgggttctcatgatcgttggatcccttgctgctgcagctcatgggactgctcttgttgtt
tacttacattattttgcgaagatcattcaggttcttggacttgggccacaagaacaaggg
caagacagaatggatgagcagtttgagaggttcaaagagctttctttaactattgtttat
attgctgcgggtgttttcgctgctggctggatagaggtttcatgctggattctgacggga
gagcgacagactgctgttattaggtcaagatatgttcaagtattattgaaccaagatatg
agcttttttgatacttatggaaataatggagacatagtgagccaagtcttgagtgatgtg
ctgctcatccagtctgctcttagtgaaaaagttgggaattacattcataacatggctaca
tttttcggtggtctaattattggttttgtcaactgttggcaaattgcgctcataactctg
gctactggtccgttcattgttgctgctggaggcatatccaatatatttcttcacaggctt
gctgagaatattcaagatgcttatgctgaggcagctagcattgctgaacaggcagtctct
tatgtcaggaccttgtatgcatttacaaatgaaactttagccaaatattcttatgcaacc
tcattacaagccactttgagatatggtatattgattagtcttgtgcaagggcttgggctt
ggatttacatatgggcttgcgatatgttcttgtgccttacaactttgggttggaaggttc
cttgtcacaaatcacaaagctcatggtggcgaaatcatagcagctctttttgctgtaatt
ttaagtggccttgggctgaaccaagctgcaacaaatttctattcctttgaccaaggtcga
attgctgcttttagactttttgagatgattagccgttcatcctctggtttgaaccaggag
ggaaacatcctagcttccattcaaggaaatattgaatttaggaatgtgtattttagttat
ctatctcgacctgaaattcctatactgagtggcttttatctcactgtacctgctaaaaag
gctgtggcacttgttggtagaaatggctctgggaaaagcagtattatcccactcatggaa
cggttttatgatcctacattaggggaagttcttctagatggagagaatattaaaaaccta
aagctggagtggctgagaagccaaataggacttgttactcaggaacctgccttgcttagt
ttgagcataaaagataatattgcttatgggcgagatgctacatttgatcagattgaagaa
gctgcaaaaatagcaagggcacatacattcattagttcacttgagagagggtacgagaca
caggtggggagggctggcttagcattaacggaagaacagaaaatcaaactttctattgct
agagcggtgcttttgaacccaacagtccttctgcttgatgaagttactggtggacttgat
tttgaagctgaaagaactgttcaggaagctctagatctactcatgttgggacgttcaact
ataataatagctcggcagctttgtctcataagaaatgttgattatatagctgtgatggag
gagggtcagctggttgaaatgggtacacatgatgagttagtagcccttgatgggttgtat
gctgagctcctcagatgtgaggaggctgcaaaacttccaaggaggatgccagttaggaat
tacaaggagacgtcaacattccaaattgaaaaggattcttcatcagttcacagcttccaa
gaatcttcatctccaaagtttgtcaaatcaccttctctccaaagagttcatggtatattt
cggccccaagatggtgcttttaacacacaagaatcacctaaagctcatagtccaccacca
gagaagatgctggaaaatggcttaccagtggatgctggtgataaggaaccatcaattagg
aggcaggatagttttgaaaggagacttccggagttgcctaaacttgatgttcagtctgcc
cagcagcagaaatcaaatgattcggacccagaatctcctgtatcaccccttctgacatct
gatcctaaaaatgaacgttcgcattctcagacttttagtcggcctctcagttactctgat
gatatcccaattgaagttaaggaagcaaaggatgtgcatcatggggaagctccgtcattt
tggaggttggcacagcttagttttgcggagtggctctatgctgtcttgggaagcattggt
gcagcaatctttggctctttcaatccacttcttgcatatgttattgcactgattgtaacg
gcatattataggcgtcaggaacatcatcatttacaagatgaagtagacaggtggtgtttg
ataattgcctgtatgggtatagtgactgttgttgccaacttcttgcaacacttctacttt
ggaattatgggggagaaaatgactgaacgggtgcgcagaatgatgttctcagcaatgctg
cggaatgaaattggatggtttgataatgaagagaatagccctgataacttgtccatgcga
ttggcaaatgatgctacatttgtaagggctgcttttagcaatcggctttcaatatttata
caggatagtgctgctgttattgttgctatactaattgggatgttgctacattggcggttg
gcacttgtggcatttgcaacccttccagtcttagctgtctctgcttttgcacagaaatta
tggctcgctggattttcaaagggaatccaggagatgcataggaaggcatcattggtcctc
gaggatgcagtgaggaacatatacactgttgtagcattttgtgctggtaataaggtaatg
gacctctacaggctacagttgaagaaaatattgaaacagagtttctttcatggaatggca
atagggtttgcatttggcttttcacagtttcttctttttgcctgcaatgctctgctcctt
tggtacactgcactctctgttaaaagacgctatatagatctgcctacagccctcaaggag
tacatggttttctcttttgcaacttttgcactggtggagccatttggattggcaccatac
atacttaaaaggcggaaatctctcacttcagtttttgaaattattgaccgagtccctaaa
attgagccagatgaaaactcagcattgaagccaccgaacgtctacggaagcattgagctg
aaaaatgttgatttctgctatcccactcgtccggaaatgttggtattgagcaatttcagt
cttaaagttaatgggggacaaactgtagccattgttggagtttcaagatctgggaagagt
accataatatctctaatagagaggttttatgatccagttgcaggtcagattctacttgat
ggacgggatttgaagctctacaatttgaggtggttgaggaaccacttaggtcttgttcaa
caggagccaattattttctcaactacaatccgggaaaacattatatatgcaaggcacaac
gctagcgaatctgagatgaaagaggctgcaagaatagctaatgctcaccattttatcagc
agcttacctcatggttatgatacacatgtgggtatgaggggtgtggatttgaccccagga
cagaaacaaagaattgctattgctcgagtggtgctgaagaatgctcccatcttattattg
gatgaagctagctcgtcgatcgaatctgagtcaagccgagtggtgcaggaggcacttgac
acattgataatgggaaacaaaacaaccattttgatagcccatagagctgcaatgatgaag
catgttgacaacattgtagtacttaacggtggtcgaattgttgaggaagggacacatgat
tctttgttagcaaaaaatggcttgtatgttcgtttaacgcaacctcatttcgggaaaggt
ttgcgtcagcatcggctggtttag
DBGET
integrated database retrieval system
