Gossypium arboreum (tree cotton): 108460546
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Entry
108460546 CDS
T05776
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108460546
Transcription factors [BR:
gab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108460546
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108460546
NCBI-ProteinID:
XP_017615556
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Position
3:35353642..35357696
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AA seq
579 aa
AA seq
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MAAASSSKPFFGTREENQNQMMQEQSSIATPTSSTAPTTAPQKRKRNHPGTSYPDAEVIA
LSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLRQKTTKEVKRKVYLCPEPTC
VHHDPSKALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCG
TLFSRRDSFITHRAFCDALAQESARHPTNLSTMGSHHLFGDNHHMSLGLSHVRSQIPPLQ
DQNQVQPSSNLLRLGSTSGAVKFDHLISPSNHSSLQNMPSSMFFMAEAANQGFHQDHQSH
HGHGSYPNKPLHGLMQLPDLQGSTNNSPTSANFFNLGFFSNTSATSSISTSEIGGGQGPA
LFPSNMGDQVGSGMSSLYTTSMQHENISPHMSATALLQKAAQIGSTTSNNTTSTLLRGLG
SSLSGATKSDRPVFSPNFGSNFEGGNGSETLRSHMEDDSNLQGLMNSLAANGNSSIFDGG
PSHGQDNNFGGFNGSGLTLESQSSNANFCNVNEAKLHQNLAAGIGGTDKLTLDFLGVGGM
VGNISGGFSQREQQGINISSLEPDMKSSAQPNTEHFGRA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctcatcgtccaaacctttttttggaaccagggaagaaaatcaaaaccag
atgatgcaagaacaatcatccatcgctacacccacttcgtcaactgctccaaccactgca
cctcagaagagaaagagaaatcaccctggaacatcatatccagatgcggaagtgatagca
ctatctcccaagactctaatggcaacaaacaggttcatttgtgaggtatgcaacaaaggg
ttccaaagggagcaaaatttacaactccacagaagaggacacaatctgccttggaagcta
agacaaaagacaacaaaagaagtgaagaggaaagtttatctttgcccagaacccacatgc
gttcaccatgacccttctaaggcacttggcgacctcactggcatcaaaaagcattactca
agaaaacatggtgagaagaaatggaagtgtgagaagtgttccaagaggtatgccgtgcaa
tcggattggaaagctcattcaaagacttgcggcactagagagtacagatgtgattgtggc
actcttttctcaagacgtgatagttttattactcaccgggccttttgcgatgcactggct
caagagagtgctagacaccctaccaacttaagcacaatgggcagtcatcacctatttgga
gataatcatcacatgagtttagggttatcccatgtccgttctcaaattccgccactgcaa
gaccagaatcaagttcaaccgtcgagtaatctgttgaggttgggaagtacatctggagcg
gtaaagttcgatcaccttatatctccatcaaaccattcttcattacagaacatgccatcg
tctatgttcttcatggctgaggctgcaaaccaaggctttcatcaagaccatcaatctcac
catgggcacggatcatatcccaacaaaccattgcatgggcttatgcaacttcctgacctt
caaggaagtactaacaattcccccacttcagccaattttttcaatttaggcttcttttcc
aataccagtgctacaagcagcataagtaccagtgaaataggtggcggtcaagggcccgca
ttgttcccttctaacatgggagatcaggttggttcaggaatgtcctctctttataccact
tcaatgcaacatgagaacatctctccacatatgtcggccactgcattgcttcaaaaagct
gctcaaataggttcaactacaagcaacaacactacttccactttgctaaggggattagga
agctcattatcaggtgcgactaaatccgacagacctgttttctcccctaacttcggcagt
aatttcgagggtggcaatggaagtgaaaccctacgatcacatatggaggatgatagcaat
ctgcaaggattaatgaactcacttgcagcaaatggtaactcttccattttcgacggcggc
ccaagccatgggcaagataacaacttcggagggttcaatggaagtgggttgacactagaa
tcgcaaagcagtaatgctaacttttgcaacgttaacgaggcaaagttgcatcaaaatctc
gccgcaggcataggcgggactgataaattgaccttggattttctaggcgttggaggaatg
gttggaaacattagtggtggtttttcgcagagagaacaacaagggattaacattagctcc
ttggaacctgacatgaaatcatcagctcaaccaaatactgaacactttggtcgtgcataa
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