Gossypium arboreum (tree cotton): 108460550
Help
Entry
108460550 CDS
T05776
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X2
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108460550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gab03016
]
108460550
Enzymes [BR:
gab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
108460550
Transfer RNA biogenesis [BR:
gab03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108460550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
RecX_HTH1
Motif
Other DBs
NCBI-GeneID:
108460550
NCBI-ProteinID:
XP_017615564
UniProt:
A0ABR0NZ95
LinkDB
All DBs
Position
8:138553937..138568061
Genome browser
AA seq
1072 aa
AA seq
DB search
MAILAFPLVISFLKPNAPYFSLLRLAKPNAILTVPPPPLNRRYFRRTSATSAVHTSSVQQ
QSSTDASDKPKKASVLTFQQAIQRLQEYWASVGCAIMQCSNTEVGAGTMNPLTYLRVLGP
EPWNVAYAEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGIDISE
HDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLSPISVEITYGLERIL
MLLQGVDHFKKIQYADGITYGELFMENEKEMSAYYLEHASVDHIQKHFDFFEEEARSLLA
SGLPIPAYDQLLKTSHAFNILDSRGFVGVTERARYFGRMRSLARQCALLWLKTRESLGHP
LGVVSESVDHVCPKEVLEAAVKKVHHDPRLFVLEIGTEEMPPHDVVNASQQLKDLVLQLL
EKHRLNHGGIQAFGTPRRLVISVESLCPKQAENELEVRGPPALKAFDPQGNPTKAAEGFC
RRYAVPLDSLFRKADGKTEYVYACVKESARFALEVLSEELPGMLAKITFPKSMRWNSQVM
FSRPIRWIMSLHGDAVVPFTFAGILSGNLSYGLRNTATATVMVESAESYCSIMKNAGIGI
DIEDRKKTILERSHLLAKSVNGNIAFQESLFNEVVNLVEAPVPVLGKFKESFLELPDDLL
TMVMQKHQKYFPITDGNGKLLPYFIAVANGAINEMVVRKGNEAVLRARYEDAKFFYELDT
NKRFKDFRTQLKGILFHEKLGTILDKMTRVESMVCKLTMGFGVEEDMLLIIKEAASLAMS
DLATAVVTEFTSLSGIMARHYALRDGYSEQIAEALFEITLPRFSGDLLPKSDVGIILAIA
DRIDSLVGLFAAGCQPSSTSDPFGLRRISYGLVQILVEKDKNMNLKHALELAADVQPIKV
DATTIEDVYQFVTRRLEQYLVDKGISPEVVRSALAERANLPCLAAKTARKLEALSKGDLF
PKVVEAYSRPTRIVRGKEVDADIEVDATAFETNEERALWDTFLSVENKIHPGIEVDDFIE
VSSELVQPLEDFFNQVFVMVEDERIRKNRLCLLKKIADLPKGVVDLSVLPGF
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggctatccttgctttccccttagtcatttcctttcttaagcccaacgctccttacttc
tctctcctccgtctcgccaagcccaatgccatcctcaccgtgcctccgcctcctttgaac
cgccgctacttccgccgaacatccgccacctccgcagttcacacttcttcagttcagcaa
cagtcctcgacagatgccagcgataagccgaagaaagcttctgttctgacatttcaacaa
gctattcaaagactccaggaatattgggcgtcggttggatgtgctataatgcaatgcagc
aacaccgaggttggagccgggaccatgaatcctttgacatacttgagagttcttggtcca
gaaccatggaatgttgcgtatgcggaacctagcatccgtccagatgatagtcgttatggg
gaaaatcctaataggctccaacgccacactcaatttcaggttatactaaagcctgatcct
ggaaattctcaagacctctttattcgtagcctttcagcgttaggtattgacattagtgag
catgatatacggtttgttgaggacaattgggagagcccggtactgggtgcatggggtttg
ggctgggagatctggatggatggtatggagatcactcagttcacctatttccagcaggct
ggaagtcttcaattgtcaccaatatctgttgaaatcacatatggccttgagcgtatactt
atgttacttcagggtgtcgatcattttaagaaaattcagtatgctgatgggatcacatat
ggtgaacttttcatggaaaatgagaaggagatgagtgcttattatttggaacatgccagt
gttgaccatattcaaaagcattttgatttttttgaggaagaagctcgttccttacttgct
tcaggattgccaattcctgcgtatgaccagcttctgaagacatctcatgcttttaatatc
ttggactctagaggctttgttggagtaacagagcgtgctcgttattttggtcgcatgcgc
agtttagcccgtcaatgtgctctactctggttaaagacacgagaatctcttggacatcct
ttgggtgttgtctctgaatctgttgaccatgtatgtcctaaagaggttctggaggcagca
gtcaaaaaggtgcaccatgatccaagattgtttgttcttgaaattgggactgaagagatg
ccacctcatgatgtagttaatgcaagccagcaacttaaagatttagtgttgcagctactt
gaaaaacatagattgaaccatggtggcattcaggcttttggcactcctcgcagactagtg
atatctgttgaaagtctttgtccaaagcaagcagagaatgagcttgaggttcggggacct
cccgctttgaaagcctttgaccctcagggaaatcctacaaaggctgctgagggtttttgc
cgcagatatgctgttccactagattctttgttcagaaaggcggatgggaagacagagtat
gtttatgcctgtgtaaaagaatccgctcgatttgctttggaggttttatctgaagaattg
cccggaatgcttgctaaaataactttcccaaagtcgatgcgctggaactcacaggtcatg
ttcagcagacctattcgttggattatgtccctccatggagatgcagtggttccatttaca
tttgctgggattttgagtggaaacttatcttatggtcttcgtaatactgcaacagctact
gtcatggtagaaagtgcagaatcttattgtagtataatgaagaatgctggaattggtatt
gatattgaggatagaaagaaaacaattttggagcgctcacatttattagcaaaaagtgtc
aacggaaatattgcttttcaggaaagcttattcaatgaggttgttaatcttgttgaagca
cctgttcctgtgcttggaaagtttaaagagtctttcttagagcttcccgatgatctttta
actatggttatgcagaagcaccaaaagtattttcccattactgatggtaatggaaagctg
ttgccctacttcattgcggtagcaaatggagcaatcaatgagatggtggtgagaaaagga
aatgaagctgttctcagagctcgatatgaagatgccaaatttttctatgagctggataca
aataaaagatttaaggatttccgtactcagctgaaggggattctttttcatgagaagtta
ggaacaattctggacaagatgacacgagttgaaagcatggtttgcaagctaaccatgggc
tttggagttgaagaagatatgcttctgattattaaggaggctgcatcacttgcaatgtca
gatcttgctactgctgttgtcacagaatttacttcactctctggcataatggcccgtcat
tatgctcttagagatggctattcagagcagattgctgaggccttgtttgagataacactt
cctaggttttctggagatttgctccccaaaagtgatgtgggaataattcttgcaatagct
gaccgaattgatagccttgttggcttatttgctgctggttgtcagcctagctctactagc
gatccatttggcctaagaagaatctcttatggcctagtccagatactggtggaaaaggat
aaaaatatgaatttgaaacatgctctggaacttgctgctgatgtccagcccattaaagtt
gatgcaaccacaatagaggatgtatatcagtttgttacacgaagactagagcaatatctg
gttgataagggaataagtccagaagtggttcgttccgcccttgcagagcgtgctaacttg
ccttgtctagctgctaaaacggcacggaaattggaagccttgtcgaaaggagatcttttc
cccaaggttgtagaagcttattctcgtccaactagaattgtccgtggaaaggaagtggat
gcggatattgaggtggatgctactgcatttgaaacaaatgaagagagagcattatgggac
actttcttgtctgttgagaacaaaattcaccctggtatcgaggttgatgacttcattgaa
gtatcctcagagctagtacaacctttggaagatttttttaatcaagtttttgtgatggtg
gaggatgaaagaattagaaagaacaggttgtgtttgcttaagaaaattgcagaccttcca
aaaggtgtggtagatctctcagttttgcctggattttga
DBGET
integrated database retrieval system
