Gossypium arboreum (tree cotton): 108460562
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Entry
108460562 CDS
T05776
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108460562
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gab04040
]
108460562
Ion channels [BR:
gab04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108460562
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Paralog
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
108460562
NCBI-ProteinID:
XP_017615575
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Position
4:complement(558514..565440)
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AA seq
712 aa
AA seq
DB search
MNYPPEKVVRFQDWNSEKTCEGHYANNNGINSGKFTFAINSFSEKFQRGVESGSERIKAI
RKSFKSSSFNHVVAKGFGSSKKVLDPQGPFLQRWNKIFVLSCIIAVSIDPLFFYVPVVND
DKKCLALDEKMETTACVLRSFTDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDSQAIAK
RYLRSYFLIDVLAVLPLPQLVILIIIPEMSGLKSLNTKNLLKIVVLFQYLPRVFRIYPLY
KEVTRTSGILTETAWAGAAFNLFLYMLASHVFGASWYLFSVEREFTCWKGACGNNTTCHR
SFYCDNGDSYFRTLLNQSCPIQTPNTTLFNFGIFLDALQSGIVESKDFPEKFFYCFWWGL
QNLSSLGQNLETSTYVFEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRD
AEQWMSHRLLPENLRERIRRYEQYRWQETRGVDEENLLRNLPKDLRRDIKRHLCLALLMR
VPMFEKMDEQLLDAMCDRLKPVLYTEESYIVREGDPVDEMLFIMRGKLLTVTTNGGRTGF
FNSEYLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALTEVEAFALMADDLKFVASQFR
RLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLREEENRLQDALANAGGSS
PSLGATIYASRFAANALRALRRNRSRKARVTERVPPLLLQKPAEPDFTAEEQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaattatccaccagagaaggttgtgaggttccaggactggaattcggagaaaacctgc
gaaggacattatgctaataataatgggataaattcagggaaatttacatttgcaataaat
tcattttcagaaaagtttcaaagaggggttgaatctggttctgagaggattaaagcgatc
agaaagtcatttaaatctagttcattcaaccatgttgttgctaaaggctttggttctagt
aagaaagttcttgatccacaggggccattccttcaacgctggaacaagatatttgtatta
tcatgtataatagcagtctcaattgatccactgttcttttacgttccagtggttaatgat
gacaagaagtgccttgccttggatgaaaagatggagaccactgcttgtgtgctgcgttca
ttcactgatatcttctatataatccatatcatttttcagtttcgtactggattcattgca
ccttcttctcgtgtatttggaagaggtgttttagttgaagattcacaggcaatagcaaag
aggtatctgcggtcatactttttaattgacgttctagcagttcttcccctaccacagctg
gtgattttaattatcatacctgaaatgagtggtttgaagtcattgaatacgaagaacttg
ttgaaaattgttgttctcttccaatatcttccaagagtttttcgaatttatccactgtac
aaggaagttacaaggacctctggcatactaactgaaactgcatgggctggtgctgcattc
aatctgtttctttacatgctagcaagccatgtttttggggcttcttggtacttgttttcc
gttgaaagggaattcacatgctggaaaggcgcctgtgggaataatactacatgccaccgc
tcattttactgtgacaatggtgattcttattttaggacattgctaaatcagtcatgcccc
attcaaacacccaacacaacgcttttcaattttggaatattccttgatgctcttcaatct
ggtattgtggagtcaaaagattttccagagaaatttttttactgtttctggtggggcctg
caaaacctaagttctctgggtcagaaccttgaaactagtacctatgtattcgaaatctgc
tttgcagttttcatttcgatctcaggcttggttctcttttcatttctcattgggaatatg
cagacatatttgcagtccacaactaccagattggaggagatgagagtgaaaagacgtgat
gcagaacaatggatgtcccaccgcttactacctgagaatctgagggagcggattagacga
tacgagcaatacaggtggcaagaaactagaggagttgatgaagagaatttacttcgtaat
ctaccaaaggacttaagaagggacataaagcgccatctttgcttggctctgctcatgaga
gtgccaatgtttgagaaaatggatgagcaattactggatgcaatgtgtgaccgtctcaag
ccagttctctacacagaggagagctacattgttcgggagggagacccagttgatgagatg
ctcttcatcatgcggggcaaactattgacagtgacaacaaatggtggaagaactggcttc
tttaattctgaatatctgggggcaggagacttctgtggagaggaacttctcacatgggct
ctagatcctcattcttcatcgaacctccctatctcaacaagaactgtccgtgcccttaca
gaagttgaagcttttgctctgatggctgatgacttaaagtttgttgcttctcagttccgt
cggcttcatagtaagcagctgcgccacactttcaggttctattcacagcagtggcgaact
tgggctgcttgttttatacaagctgcttggcgccgttatagcaaaaagaaactagaggaa
tctttgagagaagaggagaatagattgcaagatgctttagccaatgctggtgggagctcg
ccaagtctgggtgccactatttacgcatcacggtttgctgccaatgcgcttcgtgcttta
cggcgaaaccgttctcgtaaggcaagagtaacagagagggtaccgcctctgctgcttcag
aagccagcagagcctgattttactgctgaagaacagtaa
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