KEGG   Gossypium arboreum (tree cotton): 108460606
Entry
108460606         CDS       T05776                                 
Name
(RefSeq) cullin-3A-like isoform X1
  KO
K03869  cullin 3
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108460606
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gab04121]
    108460606
   03400 DNA repair and recombination proteins [BR:gab03400]
    108460606
Ubiquitin system [BR:gab04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     108460606
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108460606
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DNA_repr_REX1B DUF4962 WAC_Acf1_DNA_bd
Other DBs
NCBI-GeneID: 108460606
NCBI-ProteinID: XP_017615655
LinkDB
Position
9:5452217..5456076
AA seq 733 aa
MSAQKKKAFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVTTMTSHLKEISNSIEAAQGGLFLDELNRKWAEHNKALQMIRDILMYM
DRTFIPNTHKTPVHELGLNLWRDVVIHSHAIQSRLQAILLENVRRERSGEVIDRGLMRSI
TKMLMDLGPSVYQDDFEKHFLEVSADFYRLESQEFIESCDCGEYLKKAERRLNEEIERVS
HYLDTRSEVKITNVVETEMIESHMHRLVHMENSGLINMIVDEKFEDLGRMYCLFRRVSNG
LVLIRDVMTSFIRDTGKQLLTDPERLKDPVDFVQHLLDLKDKYDKIITSAFRNDKTFQNA
LNSSFEYFINLNSRSPEFISLFVDDKLRKGLRGVTEEDVELVLDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSGKSVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFHA
SHGSDIGDGPMLSVQVLTTGSWPTQPITTCNLPAEILGICEKFRNYYLGTHTGRRLSWQT
NMGTADLKATFGKGQKHELNVSTYQMCVLMLFNDADRLSYKEIEQVTEIPTSDLKRCLQS
LACVKGKNVLRKEPMSKDIADTDTFLFNDKYTSKFFKVKIGTVAAQRESEPENQETRQRV
EEDRKPQIEAAIVRIMKARRVLDHNNIVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLE
RDKGDRKLYRYLA
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgagtgctcagaagaaaaaagcgtttcaaatagaggcgtttaagcatagggtggtggtt
gatcccaaatatgcagagaagacgtggaagattctggaacatgctattcatgaaatttat
aatcataatgctagtggacttagctttgaagaactttacaggaatgcatacaatatggta
ctgcataaatttggggagaaactgtattccggacttgtcactactatgacttctcatcta
aaggagattagtaattcaattgaggctgctcagggaggattatttttggatgaacttaac
agaaaatgggcagagcataacaaggcattgcaaatgatccgagatatattgatgtacatg
gataggaccttcatcccaaacacccacaaaaccccagttcatgagcttgggttaaattta
tggagggatgtcgtcatccattcccatgcaatccagtctaggcttcaggctatacttctt
gaaaatgtaaggagagaacggagcggtgaagtcatagacaggggtttaatgagaagtatc
acaaagatgttaatggatctaggtccttccgtttatcaggatgatttcgagaagcatttt
cttgaggtttcagctgatttttatcgtctcgagtctcaagagttcatagagtcctgtgat
tgtggggagtatctaaagaaagccgagaggcgcctaaatgaagaaatagagagagtctcg
cattacttggacaccagaagtgaagtcaagataacaaatgtggtagaaacggagatgatt
gaaagtcatatgcacaggcttgtgcacatggagaactcggggttgattaatatgattgtc
gatgaaaaatttgaggacttaggaaggatgtattgcttgtttcgtcgagtatccaatggg
cttgttttaatcagagatgtcatgacttcattcattcgtgatactggtaagcagttactc
actgatcctgaaaggctgaaggatcctgtcgattttgtgcaacatttgttggatttaaag
gacaaatacgacaagattatcacttcagcatttagaaatgacaagacttttcaaaatgca
ttaaattcctcgtttgaatatttcatcaatctgaattctcggtctccagagttcatctct
ttgtttgttgatgacaagcttcgaaaaggtttgaggggggttactgaagaggatgtggaa
ttggtactcgacaaggtgatgatgctcttccgttaccttcaagagaaagatgttttcgag
aagtactacaaacaacacttggccaaaaggcttctttcagggaagtccgtctctgatgat
gctgaaagaagtttgatcgttaagctcaaaacagagtgtgggtatcaatttacttcaaag
ttggagggtatgttcacagatatgaagacatcacaagatacgatgcaaggtttccatgca
agtcatggttcggatataggggatggtcccatgctttctgtccaggttctgacaacagga
tcttggccaactcaacctattactacatgcaaccttcctgctgaaattctgggaatatgt
gagaaattccgtaattattacctaggtacccataccggacggagattgtcttggcaaact
aacatggggacagctgatttgaaggcaacctttggtaagggacagaagcatgaactgaat
gtttccacataccagatgtgtgtccttatgctcttcaacgatgctgatcgactaagctat
aaggagatcgagcaggtgaccgagataccaacctcggacttgaaaaggtgcttgcagtct
cttgcctgtgttaagggaaaaaatgtgcttcgcaaggaacctatgagcaaggacatagca
gacactgatacctttcttttcaatgacaagtatacaagcaagttcttcaaggtcaagata
ggcactgtggctgcgcaaagggagtcggaacctgaaaatcaagaaactaggcagagagtg
gaggaagatcgaaaaccgcaaattgaggcagcaatcgtgaggatcatgaaagctaggcgt
gtgctggatcataacaacattgttgctgaggtcacaaaacagctacagtcacggtttctg
cccaaccctgttgtaattaagaaacggatcgagtcccttatcgagcgggagttcctggag
agggataaaggtgacaggaagttgtatcgctaccttgcttga

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