KEGG   Gossypium arboreum (tree cotton): 108460630
Entry
108460630         CDS       T05776                                 
Name
(RefSeq) protein transport protein SEC31 homolog B
  KO
K14005  protein transport protein SEC31
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108460630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gab04131]
    108460630
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gab02044]
    108460630
Membrane trafficking [BR:gab04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    108460630
Secretion system [BR:gab02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   108460630
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_Prp19 Beta-prop_TEP1_2nd WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd WDR55 TPR_Sec16 Beta-prop_EIPR1 TPR_GEMI5 MIOS_WD40 SRA1 EIF3I Beta-prop_SCAP Prp18
Other DBs
NCBI-GeneID: 108460630
NCBI-ProteinID: XP_017615686
LinkDB
Position
11:6981601..6991094
AA seq 1111 aa
MAYIKWVNRSASVALAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDLQSEDRELPVVGQ
CPSSERFNRLAWGKNGSGSDEFSLGLIAGGLVDGSIHIWNPLTLIRSEASEQALVGHLSR
HKGAVRGLEFNAIAPNLLASGADDGEICIWDLAAPALPTHFPPLKGSGSATQGEISFLSW
NSKVQHILASTSYNGTTVVWDLKKQKPVISFADSVRRRCSVLQWHPDVATQLVVASDDDG
SPALRLWDMRNIMSPVKEFLGHTKGVITMAWCPSDSSYLLTCAKDNHTICWDTVTGEIVC
ELPAGNNWNFDVHWYPKMPGIISASSFDGKIGIYNIEGCSRYSVRELDFGAASLRAPKWY
KRPVGASFGFGGKVVSFRPCLSGLGSSASSEVFMYNLVPEESLVSRSSEFESAILNGERS
SLRVLCEKKSYESESQDDRETWGFLKVMFEDDGTVRTKLLMHLGFSLTAEEKDTVQDDRS
WSVNETTHEDKVEEKRGYGGEKEATLFAADNGEDFFNNLPSPKADTPVSTSENSFAVEST
VPGADLIPQESDGLEESADASFDDAVQRALVVGDYKGAVEQCIAANKISDALVIAHVGGS
SLWESTRDQYLKMSRSPYLKVVSAMVNNNLTSLVNSRPLKFWKETLALLCTFAQGEKWAV
LCDMLATKLMVAGKTLAATLCYICAGNIDKTVEIWSSCLTTENDGKSYVDLLQDLMEKTI
VLALATGQKRFGASLCKLVEKYAEILASQGLITTAMGYLKLFGSDELSPELVILKDRIAF
STVHEKETSSSVFGNSHPASGPEFEPSQQELATSQIHASVPDSAYDENYQHSFSSYGGYA
PPALYQPQPLPANTFVPTTAPQFSSANFAPSPGTTQPTVRPFVPSNPPVLRNADKYQQPT
TLGSQLYPGGAYPTYPLPCGAGSLASVPSPMGSIPGPKVSQVVAPTSTPRGFMPVTNPPV
VQRPGMGPMQPPSPTQSTPVQPAAAPAAPPPTVQTVDTSNVPAHQKPVITTLTRLFNETS
QALGASRANPAKKREIEDNSRKIGALFAKLNGGDISKNASDKLIQLCQALDNNDFGTALQ
VQVLLTTSEWDECNFWLATLKRMIETRQNVR
NT seq 3336 nt   +upstreamnt  +downstreamnt
atggcgtatataaaatgggtcaatagatcggcctcagtggcactggccccggacgcgccg
tacatggcggcggggacaatggctggggcggtcgatctttccttcagctcatcggctaat
ctcgagatcttcaagcttgatttacagagtgaagatcgggagcttcccgtggtaggtcaa
tgccccagctcagagcgttttaaccgccttgcttgggggaagaacggatccggctccgac
gagttttcactcgggctcattgctggtggcctcgttgatggcagcatccatatttggaat
ccgttgaccttgatccgctctgaggcaagtgaacaagctctggttggacatctttcaagg
cacaaaggggccgttcgtggtcttgagttcaatgccattgctccaaatttactagcatct
ggggcagatgatggtgaaatctgcatctgggatttagcagcacctgcactacccacccat
tttccacctcttaagggtagtggttctgccactcaaggtgaaatctcatttctgtcttgg
aatagcaaggttcaacatatattggcatcaacttcatataacggaactactgttgtttgg
gacttgaagaagcaaaaaccagtgataagttttgcagattcagtaagaaggcgatgttct
gttctgcagtggcatcctgatgttgccactcaacttgttgttgcatccgatgatgatggt
tcacctgcccttaggctttgggatatgcggaacataatgtcaccagtgaaggagtttcta
gggcatacaaaaggtgtaattacaatggcatggtgtccctctgacagctcttatttgctc
acttgtgcaaaagataatcatactatttgttgggatacggttactggagagattgtctgt
gaattgcctgctggtaacaactggaactttgatgtgcactggtatccgaagatgcctgga
attatatcagcatcttcctttgatggcaaaattggcatttacaatattgagggttgcagc
cgatacagtgttagggagcttgattttggtgcagcgtctttgagagctccaaaatggtat
aaacgtcctgttggagcatcttttggttttggaggaaaagttgtctcttttcgcccttgt
ttatctggtttaggtagttctgcatcatcagaggttttcatgtataacttagttcctgaa
gaaagtcttgtcagccgttcatctgaatttgaatctgcaatactgaatggggagaggtct
tcactaagggttttatgtgagaagaaatcctatgagtctgaatctcaggatgatcgagaa
acatggggcttcttaaaggtgatgtttgaagatgacgggactgtgaggacaaagttgctc
atgcatcttggttttagtttaactgcagaagaaaaagatactgtacaagatgaccgctct
tggagtgtgaatgagactacacatgaggataaagtggaagaaaaaaggggctatggggga
gagaaagaagctaccctctttgcagctgataatggggaagatttcttcaataatcttcca
agtcccaaagctgatacacctgtttcaacttccgaaaatagttttgctgttgagagcaca
gttcctggtgcagatctaatacctcaagaatcagacggactggaggaaagtgcagatgca
tcatttgatgatgctgttcaacgtgctttggtggtgggtgactacaaaggggcagtcgag
cagtgcattgctgcgaataaaatctctgatgctttagttattgctcatgttggtggttct
tccttatgggagagcacacgtgatcaatatcttaagatgagccgttcaccatacctcaag
gttgtctctgcaatggtgaacaataatctcacaagccttgtaaactctaggcctttgaaa
ttttggaaagaaacattggcactcctctgtacgtttgcccagggagagaaatgggctgta
ctctgtgatatgcttgctacaaaactaatggttgcgggtaaaactctggcagcgactctc
tgttatatatgtgcaggaaatattgataaaaccgtagagatttggtcaagttgcttgaca
actgaaaatgatgggaaatcttatgttgatcttcttcaggatttgatggaaaaaacgatt
gttcttgctttggcaactggccagaagcgatttggtgcatctctatgcaagcttgttgag
aaatatgctgaaattttggctagtcaaggactcataacgacagcaatggggtatttgaaa
ctcttcgggtctgatgagctttcacctgaacttgtgatcttaaaagatcgtattgcattt
tctacagtacatgagaaagaaaccagttcttctgtttttggtaactctcatcccgcaagt
ggaccagagtttgagccttcacaacaggagttagctacatcgcaaattcatgcaagtgtt
cctgatagtgcttatgatgaaaattatcaacactctttttcttcatatggagggtatgca
cctcctgccttgtatcaacctcaaccactgcctgctaatacttttgttcctaccacagct
cctcaattttcctcggcaaattttgctccttcacctggcaccactcagcctactgttaga
ccctttgttccttcaaatcctcctgttctaagaaatgctgataaatatcagcagccaact
accctgggttctcagttatatcctggtggtgcctaccctacgtatcctttaccctgtggg
gccgggtctcttgcatctgtcccatcaccaatgggatctattcctggcccaaaagtgtcc
caagttgtagctcccacctcaacgcctaggggatttatgccagtaactaacccacctgtt
gttcaaagaccagggatgggcccaatgcaaccacccagccctacacaatcgacaccagta
caaccagctgcagcacctgctgcccctccaccaactgtgcagactgttgatacttcaaat
gtacctgctcaccagaagcctgtaatcacaaccttaactagactttttaacgagacatct
caagcactgggtgcctcacgtgcaaacccagctaagaagcgtgaaatagaggacaattca
aggaaaataggtgccttatttgccaaactcaacggtggagacatttcaaaaaatgcttct
gataagctcattcagctttgccaggctttggacaataatgattttggcacagctctgcaa
gtccaggttcttcttaccactagcgagtgggatgagtgcaacttttggcttgcaactctg
aagcggatgattgagacaaggcagaatgtaagatga

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