Gossypium arboreum (tree cotton): 108460643
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Entry
108460643 CDS
T05776
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17-like
KO
K14487
auxin responsive GH3 gene family
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108460643
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Motif
Pfam:
GH3
GH3_C
GH3_M
zf_RING-like
Motif
Other DBs
NCBI-GeneID:
108460643
NCBI-ProteinID:
XP_017615701
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Position
4:complement(4512519..4514813)
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AA seq
580 aa
AA seq
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MATNEYEGVLKKIEELTTNAGQIQDEVLGEILSRNAGTEYLRGFLHGQTEKQLFKKNVPI
VTYEDLKPYIDRIANGETSDILLAEPITAFFLSSGTSGGQPKMTPVTAQVTKNCELFRRL
YESPVIKHFGDINQAGKRMELMFARPEIETPSGLKAASVSTSIYNDSNFRTILPKLYTSP
IETIFCPDPNQGLYCQLLFGLIQRDEVVTVGSLFASTVLRGVKFLENHWQELCYDIKTGR
LSDWITDLGCRNAASLVMKPNPEQADLIENICNCKSWEGIIRKLWPKARYIGCVCTGVMR
QYTAELEFYCRGLPLVSAFYACSEAICGINLEPLCKSCDVSYTFLPNMAYFEFIPVENEH
DESIEMKRNDEDTELVDLVNVKAGQCYELVVTTCAGLYRYKVGDVLMLSGFYNNAPQFQF
VERKNVILSVDQEKTSETDLSKAVTEAKALLDPLGFILTEYTSYVDTSSAPGHYVLFWEI
KGKEGNHCKELDPKIMVECCSKMEESLHYTYKIYRKRNIIAAVEIRVVKQGSFEALMDYF
VSKGTSLSQYKKPSCIKSEEALKILDSRVIGKYFSPKLPL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaatgagtatgaaggtgtgttgaagaagattgaggaactgaccacaaatgct
gggcaaattcaagacgaggtattgggggaaatactaagtagaaatgcaggaacagagtat
ttaaggggattcctccatggtcaaaccgagaagcagctctttaagaaaaatgttcccata
gttacttatgaagatctcaagccttacatagataggattgctaatggggagacatcagat
atccttttagctgaacccattacagcgttctttctaagctctgggacttcaggcgggcag
ccaaagatgacgcctgtcactgctcaagttactaagaactgtgagttatttcgtcgcttg
tacgagtctcctgtgataaagcactttggtgacatcaaccaagccggtaaaagaatggag
cttatgtttgccagaccagagattgaaactcctagtggcctcaaggcagcatctgtctca
acgagcatatacaacgacagtaattttagaaccattttgcctaagctttacacaagcccc
attgagaccatcttttgcccagaccccaaccagggcttgtactgtcaattactttttggt
ttaatccaacgagacgaggttgtcacggttggttcactctttgcatctacggtgctaaga
ggtgtcaagtttctagaaaatcactggcaagagctatgctatgacataaaaacaggtcga
ttaagcgattggatcaccgacttaggatgcaggaatgcagcatcattggtcatgaagcct
aacccagaacaggctgacttgatagagaacatatgtaattgtaaatcatgggaaggaata
attagaaagctatggcccaaagcaaggtatattggttgtgtttgtactggcgttatgaga
cagtatactgcagaactcgagttctattgcagagggctccctttagtttcagctttttat
gcttgctcagaagctatttgtgggattaacttagagcctctatgcaaatcctgtgatgtc
tcctacacatttctccctaacatggcttactttgaattcattcctgtggaaaatgaacat
gatgaatctattgaaatgaagaggaacgatgaagatactgaacttgttgatcttgtaaat
gtgaaggctggccaatgttatgaactagttgttacaacttgtgcaggattatatcgatat
aaagttggagatgtacttatgttgagtggtttctacaataatgcacctcaattccaattt
gtggagaggaaaaatgttatcctcagtgttgatcaggaaaaaacaagcgaaacagacctt
tccaaggctgtgacagaagcaaaggctcttctcgatccacttggattcatcttgaccgag
tacactagctatgttgatacttcttcagcaccaggtcactatgtcttattttgggagatc
aagggaaaagaaggcaaccattgcaaagaacttgacccaaagataatggtagagtgttgc
tctaaaatggaagagtcattgcattatacatataaaatctataggaaaaggaacataatt
gcagctgtggagattagggtggtaaagcaaggaagttttgaggcactaatggattacttt
gtgtccaaaggaacttcattgagccaatacaaaaaacctagttgcattaaatctgaggaa
gccttgaagatattagattcaagagtgataggaaagtatttcagccccaaattaccgtta
taa
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