KEGG   Gossypium arboreum (tree cotton): 108460645
Entry
108460645         CDS       T05776                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108460645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gab03041]
    108460645
Spliceosome [BR:gab03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108460645
 Complex B
    108460645
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7
Other DBs
NCBI-GeneID: 108460645
NCBI-ProteinID: XP_017615705
UniProt: A0A0B0PMW8
LinkDB
Position
4:836973..841885
AA seq 571 aa
MTDCEETRHQGNGDNLENSYGGGSSPQPRSDDQKDSKSQHGSQDYERESSRSREKEREKV
RDKEREKDRDRHRDRDRNREKDRDRDRHHRDRHRDRSRERSERRDRGRDRDDDDYYHSQD
YDRRRDHDRDRKDRHGRSSRSHSRGRSEHRSKSRSRSRSRSRSKSKRVSGFDMAPPASAM
LAAAAAAAATAGQIPGTSPTLPGVFPSIFPLATTQPFGALPVMPVQAMTQQATRHARRVY
VGGLSPTANEQSVAIFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNA
MALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTQGSSGGLEGPDRIF
VGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNG
IKMGDKTLTVRRANQGATQPKPEQESVLQHAQQQIALQRLILQPQGVPTKVVCLTQALNV
DDLRDDEEYEDIVEDMRQEGGKYGELVNVVIPRPNPNGEPSPGVGKVFLEYSDVEGSKKA
QVAMNGRKFGGNQVIAVYYPENKFAEREYDG
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgactgattgcgaagaaacgcggcatcaaggaaacggcgataaccttgaaaacagttac
gggggagggtcttctcctcagcctcgttctgacgatcaaaaagattctaaatctcagcat
gggtctcaggattatgagagagagtcctctagaagtagggaaaaggagagagagaaagtg
cgtgacaaggaaagggaaaaagatcgtgatcgccatagggatagggataggaaccgagaa
aaggatcgtgatcgggaccgccatcatagagatcgtcatagggatcgtagtagggagcgt
agtgagaggagggatcggggaagagacagggatgatgatgattattatcatagtcaagac
tatgacagaagaagggaccatgacagagacaggaaggacaggcatgggcgcagctcccga
tcccattcgaggggtagatctgaacacagatcaaagtcaagatctcgttctcgctcacgc
tcacgctcaaagagtaaaagagttagtggctttgacatggcccctccagcttcagcaatg
ttagctgctgctgctgcagcagctgctactgcaggtcagattcctgggactagcccgacc
ttacctggagtattccctagcatctttcctcttgcaaccactcagccttttggtgctctg
cctgttatgccagttcaggcaatgactcagcaggctactaggcatgctcgtcgggtctat
gttggtgggctttctcctacagccaatgaacagtctgttgcgatattcttcagccaagtc
atggctgcaattggtggaaacactgctggtccaggtgatgctgttgttaacgtctacata
aaccatgaaaagaagtttgcttttgtagagatgagatctgtcgaggaggccagtaatgca
atggctttggatgggataatattcgagggtgcacctgtgaaggtgaggaggcctagtgac
tacaatccctcgcttgctgcaactcttggcccaagccagcccagtcccaatcttaatcta
gctgctgtgggtctaactcagggctcttctggtggacttgagggtccagaccgcatattt
gttggtgggcttccttactacttcacagaagcacagatccgcgagctattggagtcattt
gggcctcttcgagggtttgatctggtaaaagatagagaaactggaaactcgaaaggctat
gccttttgtgtttatcaagacctgtcagtcacagatatagcttgtgctgctctaaatgga
attaaaatgggtgataaaactctcaccgttaggcgagcaaaccagggtgctacccagcct
aaacctgagcaagagagtgtactccagcacgcacaacagcagattgctttgcagagactt
attttgcaaccacaaggggtgcctacgaaagttgtttgcttgactcaagcacttaatgtg
gatgatctcagggatgatgaggagtatgaagacattgtggaagatatgaggcaagagggt
ggaaaatatggtgaattagtgaatgttgtcattccacgcccaaatccaaatggagaacca
tccccaggcgtagggaaggtatttctggagtactcagatgtcgaaggttccaaaaaagcc
caagtggctatgaatggtcggaaatttggtgggaatcaagttattgctgtctactatccg
gagaacaagtttgcagagagggagtacgatggctaa

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