Gossypium arboreum (tree cotton): 108460847
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Entry
108460847 CDS
T05776
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03420
Nucleotide excision repair
gab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108460847
09124 Replication and repair
03420 Nucleotide excision repair
108460847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108460847
03400 DNA repair and recombination proteins [BR:
gab03400
]
108460847
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108460847
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
108460847
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108460847
TCR (transcription coupled repair) factors
Cul4-CSA complex
108460847
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108460847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
108460847
NCBI-ProteinID:
XP_017616013
UniProt:
A0A0B0P7H7
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Position
6:1129668..1137000
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AA seq
786 aa
AA seq
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MTKAKSQAVAGSIDPNKNGLHHHHQDGNDVVFDPSSMSLGDDSKSGVPRSPATANLSRKK
ATPPQPAKKLVIKFVKAKPTMPTNFEEETWAKLKSAINAIFLKQPDSCDLEKLYQDVNNL
CLHKLGGSLYQRIEKECEEHISAALRSLVGQSPDLVVFLSLVEKCWQDLCDQMLMIRSIA
LYLDRTYVKQTPNVRSLWDMGLQLFRKHLSLAPEVEHKTVTGLLRMIESERLGEAVDRTL
INHLLQMFTALGIYSGSFEKPFLECTSEFYAAGGTKYMQQYDVPDYLKHVETRLHEEHER
CLLYLSDLTRKPLIATVERQLLERHIHAILDKGFMMLMDGHRIEDLQRMYSLFSRVNSLE
ALRQAVSSYIRRTGQGIVMDEEKDKDMVPSLLEFKASLDLIWEESFSKNEGFCNHIRDAF
EHLINIRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYK
KDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQA
RTKLPSGIEMSVHVLTTGYWPTYPPMVVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSL
GHCVLKADFTKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTAIEDKELRRTLQSLAC
GKVRVLQKLPKGREVEDDDSFVFNEGFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQ
YQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQ
IYNYLA
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagcaaagtcccaagcggtggctggttctatagacccaaacaaaaacggcctt
catcaccaccatcaagacggtaacgacgtcgttttcgacccttcatctatgtccctcggc
gatgattctaagtccggtgttcctcgttctcccgccaccgctaatctctctcgtaaaaaa
gcaaccccgcctcaacccgccaaaaagctcgtcatcaaattcgttaaagcaaaaccgaca
atgcctacaaattttgaggaggagacttgggcaaagttgaagtcagccattaatgctatc
tttttgaagcaaccagattcttgtgacttggagaagctttatcaggatgtcaataatctt
tgcctacacaagttgggaggaagcctttatcagcgaattgaaaaagagtgtgaagaacat
atatctgctgcactaaggtctttggtagggcaaagcccagatctggttgttttcttatca
ctcgttgagaaatgttggcaagatctttgtgatcaaatgttgatgattcgtagtatagcc
ttgtatcttgacagaacatatgttaagcaaaccccaaatgtacgttcattatgggacatg
ggcttgcaactcttccgaaaacatctttctctagctcctgaagttgagcacaaaactgtt
actggccttttaagaatgattgagagtgagaggttaggagaagctgtcgacagaacactc
attaaccatcttttgcagatgttcactgccttaggcatttactcaggaagctttgagaag
ccattcctagagtgcacgtctgagttttatgcggctggaggaacaaaatacatgcaacaa
tatgatgttccagattacctgaagcatgttgagactaggttacatgaagaacatgaaaga
tgtttactctacctgagtgatcttacaagaaagccactaatagcaacagtggaaaggcaa
ctccttgaacgtcatatacatgccattcttgataagggatttatgatgcttatggatgga
caccgtattgaggaccttcagaggatgtactcactgttttcaagggtcaattctcttgaa
gcactcaggcaggccgtgagttcatatattcggagaactgggcagggcattgtcatggat
gaagagaaagacaaggacatggtgccatcattgttagaatttaaggcttcacttgactta
atatgggaagaaagcttttcgaagaatgaaggattttgcaaccacattagggatgcattt
gagcatctaattaacattcgtcagaaccgacccgcagaactgatcgccaagtttctggat
gaaaagcttcgtgctggaaataagggtacttctgaagaggaattagagggtacacttgat
aaagttttggttttattcaggttcatccagggcaaggacgtattcgaagcattctataag
aaggatcttgcaaaaaggctgctgctaggaaagagtgcttctattgatgcagagaaatcc
atgatctctaagctgaagaccgagtgtggcagccagtttacgaacaaacttgaaggaatg
ttcaaggatattgaactatcaaaggagataaatgaatcattcaagcaatcatcacaggcc
aggacgaaacttccatctggaatcgagatgagtgtccacgtcttaacaaccgggtactgg
ccaacatatccacctatggttgttcgacttcctcatgagttgaacgtctatcaggacatc
tttaaggagttctacttaagcaagtacagtgggaggcggttaatgtggcaaaactcgtta
ggtcattgtgtattgaaagccgattttaccaaaggtaaaaaggagctcgcagtttcctta
tttcagactgtagttctgatgttgttcaacgatgccgagaagcttagctttcaagacatt
aaggactctactgccatagaggataaggaattgagaaggaccttgcagtcccttgcatgc
ggtaaagtacgagtcctgcaaaagttgccaaaagggagggaggtggaagatgatgattct
ttcgttttcaatgaaggattttctgctcctctctatcgtataaaggtaaacgcaatccag
atgaaagagacagtggaggaaaacacgagcactaccgaaagagtatttcaagaccgtcaa
tatcaggtcgatgctgctattgttcggataatgaagacaaggaaagtgttgagccacacc
cttttgataaccgaactcttccaacagcttaagtttccgataaaaccggctgatttgaag
aaaagaatcgagtctctcatcgacagggagtacctggaacgagacaagaacaatccacaa
atatacaattacttggcataa
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