KEGG   Gossypium arboreum (tree cotton): 108460847
Entry
108460847         CDS       T05776                                 
Name
(RefSeq) cullin-4-like
  KO
K10609  cullin 4
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03420  Nucleotide excision repair
gab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108460847
  09124 Replication and repair
   03420 Nucleotide excision repair
    108460847
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gab04121]
    108460847
   03400 DNA repair and recombination proteins [BR:gab03400]
    108460847
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gab04147]
    108460847
Ubiquitin system [BR:gab04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     108460847
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      108460847
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      108460847
Exosome [BR:gab04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108460847
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 108460847
NCBI-ProteinID: XP_017616013
UniProt: A0A0B0P7H7
LinkDB
Position
6:1129668..1137000
AA seq 786 aa
MTKAKSQAVAGSIDPNKNGLHHHHQDGNDVVFDPSSMSLGDDSKSGVPRSPATANLSRKK
ATPPQPAKKLVIKFVKAKPTMPTNFEEETWAKLKSAINAIFLKQPDSCDLEKLYQDVNNL
CLHKLGGSLYQRIEKECEEHISAALRSLVGQSPDLVVFLSLVEKCWQDLCDQMLMIRSIA
LYLDRTYVKQTPNVRSLWDMGLQLFRKHLSLAPEVEHKTVTGLLRMIESERLGEAVDRTL
INHLLQMFTALGIYSGSFEKPFLECTSEFYAAGGTKYMQQYDVPDYLKHVETRLHEEHER
CLLYLSDLTRKPLIATVERQLLERHIHAILDKGFMMLMDGHRIEDLQRMYSLFSRVNSLE
ALRQAVSSYIRRTGQGIVMDEEKDKDMVPSLLEFKASLDLIWEESFSKNEGFCNHIRDAF
EHLINIRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYK
KDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQA
RTKLPSGIEMSVHVLTTGYWPTYPPMVVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSL
GHCVLKADFTKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTAIEDKELRRTLQSLAC
GKVRVLQKLPKGREVEDDDSFVFNEGFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQ
YQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQ
IYNYLA
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgacgaaagcaaagtcccaagcggtggctggttctatagacccaaacaaaaacggcctt
catcaccaccatcaagacggtaacgacgtcgttttcgacccttcatctatgtccctcggc
gatgattctaagtccggtgttcctcgttctcccgccaccgctaatctctctcgtaaaaaa
gcaaccccgcctcaacccgccaaaaagctcgtcatcaaattcgttaaagcaaaaccgaca
atgcctacaaattttgaggaggagacttgggcaaagttgaagtcagccattaatgctatc
tttttgaagcaaccagattcttgtgacttggagaagctttatcaggatgtcaataatctt
tgcctacacaagttgggaggaagcctttatcagcgaattgaaaaagagtgtgaagaacat
atatctgctgcactaaggtctttggtagggcaaagcccagatctggttgttttcttatca
ctcgttgagaaatgttggcaagatctttgtgatcaaatgttgatgattcgtagtatagcc
ttgtatcttgacagaacatatgttaagcaaaccccaaatgtacgttcattatgggacatg
ggcttgcaactcttccgaaaacatctttctctagctcctgaagttgagcacaaaactgtt
actggccttttaagaatgattgagagtgagaggttaggagaagctgtcgacagaacactc
attaaccatcttttgcagatgttcactgccttaggcatttactcaggaagctttgagaag
ccattcctagagtgcacgtctgagttttatgcggctggaggaacaaaatacatgcaacaa
tatgatgttccagattacctgaagcatgttgagactaggttacatgaagaacatgaaaga
tgtttactctacctgagtgatcttacaagaaagccactaatagcaacagtggaaaggcaa
ctccttgaacgtcatatacatgccattcttgataagggatttatgatgcttatggatgga
caccgtattgaggaccttcagaggatgtactcactgttttcaagggtcaattctcttgaa
gcactcaggcaggccgtgagttcatatattcggagaactgggcagggcattgtcatggat
gaagagaaagacaaggacatggtgccatcattgttagaatttaaggcttcacttgactta
atatgggaagaaagcttttcgaagaatgaaggattttgcaaccacattagggatgcattt
gagcatctaattaacattcgtcagaaccgacccgcagaactgatcgccaagtttctggat
gaaaagcttcgtgctggaaataagggtacttctgaagaggaattagagggtacacttgat
aaagttttggttttattcaggttcatccagggcaaggacgtattcgaagcattctataag
aaggatcttgcaaaaaggctgctgctaggaaagagtgcttctattgatgcagagaaatcc
atgatctctaagctgaagaccgagtgtggcagccagtttacgaacaaacttgaaggaatg
ttcaaggatattgaactatcaaaggagataaatgaatcattcaagcaatcatcacaggcc
aggacgaaacttccatctggaatcgagatgagtgtccacgtcttaacaaccgggtactgg
ccaacatatccacctatggttgttcgacttcctcatgagttgaacgtctatcaggacatc
tttaaggagttctacttaagcaagtacagtgggaggcggttaatgtggcaaaactcgtta
ggtcattgtgtattgaaagccgattttaccaaaggtaaaaaggagctcgcagtttcctta
tttcagactgtagttctgatgttgttcaacgatgccgagaagcttagctttcaagacatt
aaggactctactgccatagaggataaggaattgagaaggaccttgcagtcccttgcatgc
ggtaaagtacgagtcctgcaaaagttgccaaaagggagggaggtggaagatgatgattct
ttcgttttcaatgaaggattttctgctcctctctatcgtataaaggtaaacgcaatccag
atgaaagagacagtggaggaaaacacgagcactaccgaaagagtatttcaagaccgtcaa
tatcaggtcgatgctgctattgttcggataatgaagacaaggaaagtgttgagccacacc
cttttgataaccgaactcttccaacagcttaagtttccgataaaaccggctgatttgaag
aaaagaatcgagtctctcatcgacagggagtacctggaacgagacaagaacaatccacaa
atatacaattacttggcataa

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