Gossypium arboreum (tree cotton): 108460883
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Entry
108460883 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108460883
KO
K14791
periodic tryptophan protein 1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108460883
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
90S particles
Other 90S particles
108460883
Pre-60S particles
Other pre-60S particles
108460883
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_EIPR1
WD40_Prp19
DSE1_N
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_RFWD3
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
PAC11
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_VPS8
DNAI3_WD
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
CFAP251_N
Beta-prop_WDR75_2nd
EzrA
Motif
Other DBs
NCBI-GeneID:
108460883
NCBI-ProteinID:
XP_017616061
UniProt:
A0ABR0Q731
A0A0B0NT44
LinkDB
All DBs
Position
4:4959688..4966141
Genome browser
AA seq
495 aa
AA seq
DB search
MISAIAWVPKGAAKAEPIVAELPSKEEIEEMIKSGALDRSEDNGDNGSEDEDEDMVAETE
KQTGDVAQALAVADALGKTSKNKSGTQLEDLTDGLKELDMDNYDEEDDGIELFSKGLGDL
YYPSNEMDPFLKDQDDDDSEEVEDMTIRPMDSVIVCARTEDDVSHLEVWIYEDLDEGDSN
MYVHHDVIISAFPLCTAWLDCPIRGGEKGNFVAVGSMEPSIEIWDLDIIDEVQPCLVLGG
TVEKKTKKRKKKPKYKDGSHTGAVLGLAWNKEYRNILASASADKQVKIWDVAAGKCNITM
EHHEGKVQAVAWNHHVPQVLLSGSFDRSVVMKDGRVPTHSGFKWSVIAEVECLAWDPHTE
YSFVVSLEDGTIRGYDIRAAKSDPSSESKPSFTLHAHDKAACTLSYNPAAPNLLATGSMD
KMVKLWDLSNNQPSCVASKNPKAGAVFSISFSQDNPFCLAIGGSKGKLGVWDTLTETAVS
GKFGNYSQQPNRPKA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgatatcggcaattgcatgggtgccgaaaggggcagcaaaggctgaaccaatagtggcc
gagttaccttccaaagaagaaatcgaagagatgatcaagtccggtgccttagatagaagt
gaagataatggtgataatggaagtgaggatgaagatgaagatatggtcgctgaaactgag
aagcaaactggggatgtagcccaagcacttgctgtggcagatgctcttggaaaaacttcc
aagaacaagtcagggacacagctggaagatcttacagatgggttgaaagaacttgacatg
gacaattatgatgaagaggatgatggtattgagttatttagcaaggggcttggtgacctt
tactacccaagcaatgaaatggatccatttttgaaggatcaggatgatgatgattcagaa
gaggttgaggacatgactattagacccatggattctgttatagtttgtgcacgcactgaa
gatgatgttagccatcttgaggtttggatatatgaggatttggatgaaggtgattcaaac
atgtatgtccaccatgatgttatcatttcagcatttcccctttgtactgcatggcttgat
tgtccaattagagggggagaaaaagggaattttgtggcagttggttcaatggagccatca
atagaaatatgggaccttgacattatcgatgaagtacaaccatgtttagtattaggtggc
actgtggagaagaagacaaagaaaagaaagaagaaaccaaaatacaaggatggcagtcat
actggtgctgttcttggtctagcttggaacaaggaatacaggaatatccttgctagtgca
agtgctgacaaacaagttaagatttgggatgttgctgctggaaaatgcaacataacaatg
gaacatcatgaaggcaaggttcaagcagttgcatggaatcatcatgtgccacaagttctt
cttagtggatcgtttgatcgttcagttgtgatgaaagatggaagagtgcccactcattcc
ggttttaagtggtcggtgattgctgaggttgaatgtttggcatgggatccgcacactgag
tactcgtttgtggtgagtcttgaagatggtacaatcagaggatatgatattcgagctgcc
aagtctgatccttcttccgagtcaaaaccaagtttcactctccacgctcacgacaaagct
gcttgcaccctttcatataatccggcagcaccaaatcttcttgcaactggttccatggat
aaaatggtaaaactttgggatttgtcaaacaatcaaccttcatgtgtggcgtccaagaat
cctaaagctggagctgtcttctccatttccttctcacaagataatcccttttgtctggct
attggaggctcaaagggaaaactaggagtttgggatacattaaccgagacagccgtgtcc
ggaaagttcgggaactacagccaacagccgaacagaccgaaagcttaa
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