Gossypium arboreum (tree cotton): 108460894
Help
Entry
108460894 CDS
T05776
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108460894
03041 Spliceosome [BR:
gab03041
]
108460894
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108460894
Spliceosome [BR:
gab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108460894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
RRM_occluded
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
108460894
NCBI-ProteinID:
XP_017616080
LinkDB
All DBs
Position
6:complement(1342605..1348219)
Genome browser
AA seq
422 aa
AA seq
DB search
MQHQRLKQQQQALMQQALMQQQSLYHPGILAPPQIEPIPSGNLPPGFDPSTCRSVYVGNI
HTQVTEPLLQEVFASTGPVEGCKLVRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPI
KVNWAYASGQREDTSGHFNIFVGDLSPEVTDAMLFACFSVYPSCSDARVMWDQKTGRSRG
FGFVSFRNQQDAQSAINDLSGKWLGSRQIRCNWATKGVSSSDDKQSSDAKSVVELTNGSS
EDGKETTNNEAPESNPQYTTVYVGNLAPEVTQVELHYHFHALGAGVIEEVRVQRDKGFGF
VRYCTHAEAALAIQLGNTHSFLCGKQIKCSWGSKPTAPGTSSNPLPPPAATPLAGLSATD
LLAYERQLAMNKMGGVHALMHPQGQHPLKQAAMGVGAAGASQAIYDGGFQNVAAAQQLMY
YQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccagaggctgaagcaacagcaacaagccttgatgcaacaagctcttatgcaa
caacagtctctttatcacccaggcatcttagctcctcctcagatagagccaatcccaagt
ggaaatctgcctcctggttttgatccaagtacttgccgcagtgtgtatgtcggaaacatc
catacacaagtgactgaaccactactccaagaggtttttgcaagtaccggtcccgttgaa
ggctgcaagcttgtcagaaaggaaaagtcatcatatggattcatccactacttcgaccgc
agatcagctgctcttgccatattatctctaaatggaaggcatttatttggacagccaatc
aaggtcaattgggcatatgctagtggtcagagagaggatacatcaggacactttaacatt
tttgttggggatctcagtcctgaggttactgatgcaatgctgtttgcgtgcttttctgtc
tatcctagttgttcggatgcgagggtaatgtgggatcagaaaactgggcgttcaagagga
tttgggtttgtatcatttcgaaaccagcaggatgcacaaagtgcaattaacgacttaagt
ggaaaatggcttggcagtcgacaaattcgttgtaactgggcgacaaagggtgtcagtagc
agtgatgacaagcagagctctgatgccaaaagcgtggtagaactaaccaatggctcatca
gaggatggtaaagagacgaccaataatgaggctcctgagagtaatcctcaatatactacg
gtttatgtcggcaatcttgctccagaggtcacgcaagtagaactccactatcacttccat
gctctcggtgctggggtgattgaggaggtccgtgtccagcgtgataaaggctttggcttt
gtgagatactgtactcatgctgaggcagctttggctattcaactggggaacacacactca
tttctatgtggcaagcaaattaagtgttcttggggcagcaagcctacagcacctgggaca
agttcaaacccccttcccccacctgccgccacacctttagccgggctttctgccactgac
cttttagcttatgagcgacaactagccatgaacaaaatgggtggtgttcacgcactaatg
catcctcaaggacaacaccctctcaaacaagcggcaatgggagttggtgctgctggagca
agccaggccatatatgacggtggattccagaacgtggcggctgcccagcaactaatgtac
tatcagtga
DBGET
integrated database retrieval system
