Gossypium arboreum (tree cotton): 108460902
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Entry
108460902 CDS
T05776
Name
(RefSeq) beta-hexosaminidase 1-like
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00511
Other glycan degradation
gab00513
Various types of N-glycan biosynthesis
gab00520
Amino sugar and nucleotide sugar metabolism
gab00531
Glycosaminoglycan degradation
gab00600
Sphingolipid metabolism
gab00603
Glycosphingolipid biosynthesis - globo and isoglobo series
gab00604
Glycosphingolipid biosynthesis - ganglio series
gab01100
Metabolic pathways
gab04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108460902
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108460902
00513 Various types of N-glycan biosynthesis
108460902
00531 Glycosaminoglycan degradation
108460902
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108460902
00604 Glycosphingolipid biosynthesis - ganglio series
108460902
00511 Other glycan degradation
108460902
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108460902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gab03110
]
108460902
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
108460902
Chaperones and folding catalysts [BR:
gab03110
]
Intramolecular chaperones
Others
108460902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Motif
Other DBs
NCBI-GeneID:
108460902
NCBI-ProteinID:
XP_017616091
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All DBs
Position
4:complement(14149859..14157664)
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AA seq
546 aa
AA seq
DB search
MLPFSQNSHYKLSFLLLLLWVSHLVDSKSGFELDDSLTYLWPLPSEFTSGNQTLTVDPTL
SFSALGKGGNSKILIEGFERYKKIIFKHVSGISLFDKSRGIRSVYDISELRVIVNSDSEE
LQLGVGESYTLFVAKKDGKSIVGEATIEANTVFGALRGLETFSQLCAFDYETKSVQIYKA
PWYIKDKPRFAFRGLMLDTSRHYLPIDVIKQIIESMSYAKLNVLHWHIIDEESFPLEVPS
YPKLWNGAYTKWERYTIEDASEIVSFAKMRGIHIMAEVDVPGHAESWGAGYPDLWPSSTC
REPLDVSKNFTFDLISGILSDMRKIFPFELFHLGGDEVHTDCWTSTPHIKQWLKDQNMTA
KDAYQYFVLKAQEIAISKNWTPVNWEETFNSFPSKLNPRTIVHNWLGSGVCPRAVAKGFR
CIFSNQGAWYLDHLDVPWNEVYSAEPLEGINNVSEQNLVLGGEVCMWGETADTSDVQQTI
WPRAAAAAERLWSKREAVSARNITLAILPRLHYFRCLLNRRGVQAAPVTNKYARQPPFVA
GSCYEQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgctaccattttctcaaaattctcactataaactgagtttcttgttattattattatgg
gtttctcaccttgttgattcaaagtctgggtttgagttagatgattcgttgacttatctt
tggcctttgccatctgagttcacttctggcaatcaaaccttgaccgtggacccaacttta
tctttctctgccttaggaaaaggagggaactccaagattttgattgaaggatttgagaga
tataagaagattatattcaaacatgtttctgggatttcactttttgataaatcgagaggg
ataagatctgtttatgatattagtgaattgagagtcattgtgaattccgacagtgaagag
cttcaattgggtgtgggtgaaagttatactttgtttgtggcaaagaaagatgggaaatct
attgttggagaagccacaattgaggcaaatactgtttttggtgccttaagagggttggag
acattcagccaattgtgtgcttttgattacgagactaagtcggtgcaaatatacaaagca
ccatggtacataaaagataagccaaggtttgcgtttcgtgggcttatgcttgatacatca
aggcactatttaccgattgatgtcattaagcagataattgaatctatgtcttatgccaaa
cttaatgtccttcattggcacatcatagatgaagagtcatttcctctagaagtaccttca
tatccaaaattgtggaatggtgcttatacaaaatgggaacgctatacaattgaggatgcg
agtgaaattgttagctttgccaaaatgagaggcatccatataatggcagaagtagatgtt
cctgggcatgcagagtcatggggagctgggtaccctgatctttggccttcttctacctgc
agagaaccacttgacgtttcaaaaaattttacttttgatttgatttctggcattctatca
gatatgagaaaaattttcccatttgagcttttccacttgggtggagatgaggttcataca
gattgctggacctctactccacacataaagcagtggctcaaagaccaaaacatgactgct
aaagatgcttatcaatattttgtactcaaggctcaagaaatcgcaatctcaaaaaactgg
acgcctgtcaactgggaagaaaccttcaattcttttccgtcaaagcttaatccacgaact
attgtgcacaactggttgggttccggggtttgtccaagggctgttgcgaaaggattcaga
tgcattttcagcaatcaaggtgcttggtatcttgaccatctggatgttccttggaatgaa
gtctatagtgcagagccactagaaggaataaataatgtgtccgagcaaaatcttgttcta
ggaggtgaagtttgcatgtggggcgagacagctgatacatcagatgttcagcaaacaata
tggcctcgagctgctgctgcagcagagcgattatggagcaaaagggaggctgtatccgca
cgaaacattaccttagccatattaccccggcttcattacttcagatgcctattgaatagg
cgcggggttcaagctgctcccgtcacaaacaaatacgctcgacaacctccatttgttgct
ggatcatgctacgagcaatag
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