Gossypium arboreum (tree cotton): 108460953
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Entry
108460953 CDS
T05776
Name
(RefSeq) homeobox-leucine zipper protein HDG2-like isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108460953
Transcription factors [BR:
gab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
108460953
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
TUSC1
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108460953
NCBI-ProteinID:
XP_017616160
UniProt:
A0A0B0Q126
LinkDB
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Position
12:103794521..103799785
Genome browser
AA seq
760 aa
AA seq
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MPAGVMVPARNMPSMISGNGNIGAFGTISGLSLGQQPNNNMMEGQLHPFEMTQNTSESEI
ARMRDEEFDSALKSGSENHEGVSGEDDQDPRPNKKKRYHRHTQHQIQQMEAFFKECPHPD
DKQRKELGRVLGLEPLQVKFWFQNKRTQMKTQHERQENSQLRAENEKLRADNMRYREALS
TASCPNCGGPTAVGQMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVSYPLLSSPMT
PRPLDFGSQTGSGEMYGTGELLRSINAPAEADKPMIIELAVAAMEELVRLAQMGEPLWMT
SLDGSTTVFNEEEYIRTFPRGIGPKPTGFKCEASKETCVVIMNHISLIEILMDVQQWSTV
FSAIVSKASTLDVLSTGIAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKHHAEGTWA
VVDVSLDNIRPNPAMRCRRRPSGCLIQEMPNGYSKVTWIEHVEVEDRGVHNLYKQLVSSG
RAFGAKRWIATLDRQCERLASLMATNIPTGDAGVITNQDGRKSMLKLAERMVISFCAGVG
ASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVSPKRVFDFLRDEN
SRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQTNMLILQESCTDPTASFV
IYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGSSGSSGSGVADAGGSSGGSLLTVAF
QILVDSVPTAKLSLGSVATVNNLIACTVERIKASLTCENA
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgccggccggtgtaatggttccggcgagaaacatgccgtcaatgatcagtggaaacggg
aatattggtgccttcggaactatctcaggactttcccttggtcagcagcctaataacaac
atgatggaaggtcagctccacccttttgagatgacccaaaacacttctgaaagtgaaatt
gctcgaatgagagatgaagaattcgacagtgcactcaaatctggtagcgaaaatcatgaa
ggtgtgtctggggaagatgatcaagatcctcgtcctaacaaaaagaagcgttaccatcga
catacccagcatcagattcaacaaatggaggcgtttttcaaagagtgcccacacccagat
gacaagcaaaggaaggaacttgggcgtgtattagggttagaaccattgcaagttaaattt
tggttccaaaacaagcgcacccaaatgaagacccagcatgaacggcaagagaactcgcaa
cttcgagccgagaacgaaaagctaagggctgataacatgagatatagggaagctcttagc
actgcttcatgcccgaattgtggtggtccaactgctgtaggacaaatgtcctttgatgaa
catcatctcaggcttgaaaatgctcggttaagagaagagattgatcgtatatcagcaata
gctgcaaagtatgttgggaagccagtggtgagttatcctcttctctcgtctcctatgact
cctcgaccacttgatttcggttcccaaactggctccggagagatgtatggtactggggaa
cttcttaggtcgataaatgcgcctgcggaggctgataagccaatgattattgagcttgcc
gttgcagctatggaggaactcgttagattggctcaaatgggtgaaccattgtggatgacc
agtcttgatggctcaaccaccgtgtttaatgaagaggagtatattaggacttttcctaga
ggaattggaccaaaacctaccggcttcaaatgcgaagcttcaaaagaaacttgtgttgta
atcatgaaccacattagcctcattgagattctcatggatgtgcaacagtggtctactgtg
ttctcggcaatagtttcaaaggcttccactttggatgtcctatcaacagggattgcaggg
aactataacggagccctacaagtgatgacagctgaattccaagttccttcacctcttgtt
ccaacccgagagagttattatgtaagatactgcaaacatcatgcagagggaacatgggct
gtggttgatgtttcattggataatatacgccctaatccagcaatgagatgccgacgaaga
ccatctggatgtttaattcaagaaatgcccaatgggtactcaaaggttacatggattgaa
catgttgaagtcgaagatcgaggtgttcacaatctttacaagcagctagtaagttcgggc
cgtgctttcggagccaaacgttggattgctactttggatcgacagtgtgagaggcttgca
agtctcatggctactaacattcctactggtgatgctggggtcataacaaaccaagatggg
aggaagagcatgctgaagctagccgagcgaatggtgatcagtttctgtgccggagtgggt
gcctcgacagctcacacatggacaacattatcgggaactggggcggatgatgtaagggta
atgaccagaaagagtgtggatgatccaggcagacctcctgggattgtgctaagtgctgca
acttcgttctggcttccagtttcacccaagagggtattcgatttcctcagagatgagaat
tctcgaaatgagtgggatattctttctaatggtggagttgtccaagaaatggctcacatt
gctaatggcagggatacaggcaactgtgtttcactacttcgagtcaatagtgcaaattca
agccaaaccaacatgctgatattacaagagagttgcactgatccaacagcttcatttgta
atctatgctcctgtcgacattgttgcaatgaatgtggttctaaacggtggcgaccctgac
tatgtcgcccttcttccatcgggtttcgctattcttccggatgggagtagtgggagcagt
ggaagcggcgtggctgatgcaggtggcagctctggtggatcacttctaaccgttgcgttt
cagattttggtggactcagttcctactgcaaaactatctcttggatcggttgcaacagtt
aacaatttgattgcatgtacggttgaaaggataaaagcttctctaacatgcgagaatgca
tga
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