Gossypium arboreum (tree cotton): 108461186
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Entry
108461186 CDS
T05776
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K14396
polyadenylate-binding protein 2
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108461186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108461186
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108461186
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
HDV_ag
NET2A
RBD_DEAH11
KASH_CCD
RRM_occluded
RBD_RDR6
DUF7310
Lge1
CC149
DUF3138
DUF724
Motif
Other DBs
NCBI-GeneID:
108461186
NCBI-ProteinID:
XP_017616412
UniProt:
A0A0B0PPP1
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All DBs
Position
13:complement(4470815..4475536)
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AA seq
195 aa
AA seq
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MEGDDVDMAAAESTEADLDDMKKRLKEMEEEAAALREMQAKVEKEMGSVQDPAAAAATSQ
ANREEVDSRSVFVGNVDYSCTPEEVQQHFQTCGTVNRVTIRTDKYGQPKGYAYVEFVEAE
AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMRPRGPFMAPYFFAPYGYG
KVPRLRMATRYSPYY
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacgatgtagacatggcagctgctgaatccactgaagcagatcttgatgac
atgaagaaaaggttaaaagagatggaggaagaagccgctgctcttcgtgagatgcaagct
aaagtcgagaaagagatgggttccgtacaagatcctgctgctgctgcagctacatctcag
gcaaatcgagaggaagtggattctcgatcagtgtttgtgggcaatgtggattattcatgt
actcctgaagaagttcaacagcatttccagacttgtgggactgtaaatagggttactatt
cgtacggacaagtatggtcagccaaagggttatgcttatgtagagttcgttgaagctgag
gctgtccaggaagctcttcttttgaatgaatctgaacttcatggcaggcaattgaaggtc
actgctaagcggaccaatatacctgggatgaaacaatatcgtccacgtcggtccaaccct
tttatgcgacccaggggtccattcatggctccatatttctttgctccatatggatatggg
aaggttccacggttgagaatggcaacgcgttacagcccctattattag
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