Gossypium arboreum (tree cotton): 108461314
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Entry
108461314 CDS
T05776
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108461314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108461314
Spliceosome [BR:
gab03041
]
Common components
Common spliceosomal components
SR proteins
108461314
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
108461314
NCBI-ProteinID:
XP_052879891
LinkDB
All DBs
Position
13:complement(122045465..122049881)
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AA seq
298 aa
AA seq
DB search
MGRSSRTLYVGNLPGDTRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDAEDA
IRGRDGYDFDGYYLRVELAHGGRRPSSSVDRHSSYSGSSSRGPSRRTDYRVLVTGLPSSA
SWQDLKDHMRKAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYI
RVKEYDSKYDSRRSYSRSRSPYSRSPSRSCSYSSRSRSRSKSPRARYTSQSPSVSRSVSP
CSHSVSPARSNSRSRSISRSPTPSPRSKHVSRTPPNRSPSWSRSCSLSRSRSPSVKSD
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgggccgctcaagccgtacgctctatgtgggcaatctgcctggtgacactcgtttgaga
gaagtcgaagatttattttacaagtatgggcccattgttgatattgacttgaagatccca
ccaaggccacctggttatgcttttgttgagtttgaggatcctcgtgatgcagaagatgca
atccgtggtcgagatggctatgactttgatgggtattatttacgggttgaacttgctcat
ggtggtcgaaggccgtcatcatctgtggatcgccatagcagttacagtggtagcagtagc
cgcggaccttccagacgcactgactatcgtgttctggtgactggtttgccttcttctgcc
tcatggcaagacctaaaggatcacatgcgcaaagcgggggatgtttgtttctctcaagtg
tttcgtgatcgtggaggcatgacagggattgtagattacacaaattatgatgacatgaaa
tatgctataaggaagcttgatgactctgagtttcggaatgcttttagccgggcttacata
cgggtgaaggaatatgattcaaaatatgattctaggcgcagctactctagaagccgtagc
ccgtatagtcgaagccccagtcgtagctgcagttatagtagtaggagcaggagcaggagc
aagtctcctcgggcccgatacaccagtcagtctccatctgtatctagatcggtttcgcca
tgttcccattcagtgtcaccagcccgctccaattcaagatctcgctccatatccagatca
ccaactccatctcctcgcagtaaacacgtaagcagaactccaccaaaccgcagccctagc
tggagccggagttgcagtttatctcgttctcgttcaccatcggtgaaatctgattga
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