Gossypium arboreum (tree cotton): 108461328
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Entry
108461328 CDS
T05776
Name
(RefSeq) syntaxin-32-like
KO
K08490
syntaxin 5
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108461328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108461328
Membrane trafficking [BR:
gab04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
108461328
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
BOS1_GOSR2_MEM11-like_N
Prominin
DegR
TAF2_3rd
ANIS5_cation-bd
YjcZ
DUF16
Motif
Other DBs
NCBI-GeneID:
108461328
NCBI-ProteinID:
XP_017616629
LinkDB
All DBs
Position
13:125753723..125758984
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AA seq
339 aa
AA seq
DB search
MKAKAVQSSFRDRTQEFLSVSERLRKSITSGTSQNGPSSSSSRAEEKRSVVAHQSEFNRR
ASKIGFGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVDLQLFC
NSKNEGGVSSDTSSHSTTVVDDLKNRLMSATKEFKDVLTMRTENLKVHENRRQLFSSTAS
KDSPNPFIRQRPLAAKSAAGASNNLPQWANGSASSSQLFPRKQVDAESQPLLQQQQQHQQ
QMIPLQDSYMQSRAEALQNVESTIHELGTIFNQLATLVSQQGEIAIRIDENMDDTLSNVE
GAQGALLKYLNSISSNRWLMMKIFFVLIFFLMVFLFFVA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaaagcggtacaatcgtcatttagggatcggacgcaagaatttctgagcgtg
tcggagaggttaaggaagtcgatcacgtctggaacgagccaaaatggaccgagtagcagt
agttcgagagcggaggaaaagagatctgtggttgcgcatcaatctgagtttaataggagg
gcttcgaagattggatttgggattcatcagacttcgcagaagctttcaaagttagcaaaa
ttggccaagaggacttcagtttttgatgaccctactatggaaattcaagagctcactgca
gttatcaagcaggatatcactgcccttaattctgctgtggtagacctgcaacttttctgc
aattctaaaaacgaaggtggtgtctccagtgacacatctagtcattcaaccacagttgtc
gatgacttgaagaatcgcttaatgagtgccacaaaagagtttaaagatgtcctcaccatg
cgaacagagaatttaaaggttcacgagaatagaagacagttattttcttccactgcttca
aaggattctccaaatccttttatacggcagcgccccctggctgccaaatcagcggcagga
gcttcaaacaaccttcctcaatgggctaatgggtctgcatcttcatctcagttgtttcca
agaaagcaggtggatgcagagagtcagcctttgctccagcaacaacaacagcatcaacaa
caaatgattccattgcaagacagttacatgcagagcagagccgaagctcttcaaaatgta
gaatccactattcatgagctaggcactatattcaaccagctagccactctggtttctcag
caaggagaaattgctatcaggattgatgagaacatggatgacacattatcaaatgtggag
ggagcacaaggagcattgctcaagtacctaaacagcatatcgtctaacaggtggttgatg
atgaagatattttttgtattgatttttttccttatggtattcctattctttgtggcatag
DBGET
integrated database retrieval system