Gossypium arboreum (tree cotton): 108461594
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Entry
108461594 CDS
T05776
Name
(RefSeq) syntaxin-43-like
KO
K08489
syntaxin 16
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108461594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108461594
Membrane trafficking [BR:
gab04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
108461594
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
FlxA
Prominin
EF-G-binding_N
Syntaxin_2
ZSWIM1-3_C
DGKD_4H
Motif
Other DBs
NCBI-GeneID:
108461594
NCBI-ProteinID:
XP_017616968
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All DBs
Position
13:93138311..93141602
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AA seq
326 aa
AA seq
DB search
MATRNRSLLFKKYRDALKSVRIPASSSASSAATKSSGGGPVIELVSTSLLHPNRSYTPLS
TEDPGNSSKGAVTVGLPPAWVDVSEEIAANVQRARTKMAELAKAHAKALMPSFGDGKEDQ
RIIESLTHEITNLLRKSEKRLQKLSASGPSEDSNVRKNVQRQLATYLQNLSMELRKKQST
YLKRLRQQTEGQDGVDLEMNINGNRSYAENDDLDDMIFSEHQMAKLKQNEALTVEREREI
QQVAESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEEGLKQLQKAERTQKQGG
MVMCATVLVIMCFVMLVLLILKEIIF
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaggaacaggtcgctgctattcaagaaatacagggatgcgttgaagagtgtt
agaattccggcgagttcgtcggcatcgtctgcggcgaccaagagctccggtggaggaccg
gtgatcgagctggttagtacttcgttgctccatccaaatcgttcttatactcctctaagt
accgaggatcctggaaattcaagtaagggtgcagttacagtgggtctaccaccagcttgg
gtagatgtgtctgaagaaatagcagcaaatgtgcaacgtgcacggacaaaaatggctgag
ttggctaaggctcatgcaaaagctttaatgccttcatttggtgatggtaaagaagatcaa
cgcattattgagtctcttacccatgagataactaatctgttgaggaaatcagagaagaga
ttacaaaaactctctgcatctggaccttctgaggattcaaatgttaggaaaaatgtccag
cgtcaacttgctacttaccttcagaacctatcaatggagctccggaagaagcaatcaact
tatttgaagcgcctcaggcagcaaacagagggccaggatggagttgatctagagatgaat
ataaatggaaataggtcttatgcagaaaatgatgacttggatgatatgatatttagtgag
catcagatggcaaagttaaaacaaaatgaggcactcacagttgagagggaaagggagatt
caacaggttgcggagtctgtaaatgagcttgctcagattatgaaagatttgtcagttctt
gtgattgatcagggtaccattgtggataggatagactacaacattcaaaatgttgcaact
acagttgaagaaggcctcaaacaactacagaaggcagaaagaacacagaaacagggaggc
atggtgatgtgtgctacagtgctcgttataatgtgctttgtcatgttggtcctcctaatc
ctcaaggagataatcttttga
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