Gossypium arboreum (tree cotton): 108461692
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Entry
108461692 CDS
T05776
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108461692
Membrane trafficking [BR:
gab04131
]
Autophagy
Other autophagy associated proteins
Others
108461692
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_RSE1_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
BCAS3_WD40
Beta-prop_IFT140_2nd
NBCH_WD40
Beta-prop_IFT80_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_2nd
PEP5_VPS11_N
Ge1_WD40
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
108461692
NCBI-ProteinID:
XP_017617096
UniProt:
A0A0B0P210
LinkDB
All DBs
Position
13:complement(91282422..91284842)
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AA seq
389 aa
AA seq
DB search
MSSSDDTLPHPQAECSSPPPNQTQIQLPLLIHQLSFNQDNTCFSAVTDRAFFVFNTEPYR
PLICRDFESGLSLLSMLFRFEVFVLVGSSYSPSPSAAATNTKALLWDDHASRCIGELSFR
SPIRSIRLRRDTIVVILLHKIYVYNFSDLKLLHQLETTSNPKGLCEVSQISGPMLLVCPG
LQKGSVRVENYGSKKCKFINAHSSNITCLALTHDGRVLATASSKGTLIRCFNTLDGTLIQ
EVRRGADRAEIYCLAFSPTVQWLAVSSDKGTVHVFSLKADSVVLGDDRSTSALESPLSNQ
SALSSLSILKGVLPKYFSSEWSVAQFRLPEGPRCIVAFGQQKNTIMIIGMDGSFRRCQFD
PVNGGQMTQMEEHNFLKQEEHFPSWNEDS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctccgacgatacccttccgcacccacaggcggagtgctcatccccgccccca
aaccaaacccaaatccaactccccctactcatccatcagctctccttcaaccaagacaac
acctgcttttccgctgtcaccgatcgtgctttctttgtattcaacaccgaaccttaccgt
cctcttatctgccgtgactttgagtctggtctctcccttctctctatgctttttcgcttc
gaagtctttgtccttgtgggctcctcctactctccctctccttctgcggcggccaccaac
accaaagctctcctttgggacgaccatgcttcacgttgcatcggtgagctctcatttcgt
tccccaattcgctctatccgtctccgccgtgataccatcgtggtcattctcttgcacaaa
atctacgtttacaacttttcggatttaaaactcttacaccagctggaaacgacttcaaat
ccgaaaggtttgtgcgaggtttcacagatttccggacctatgctgttggtatgtccaggc
ttgcaaaagggaagcgtcagagtagagaattatgggagtaaaaaatgtaaattcataaat
gctcatagttccaatatcacgtgtttggctttgactcacgatggcagagtcttggctact
gctagtagtaaaggaactctaatcagatgttttaatactttggatgggaccttgattcag
gaggtaaggaggggggcagatcgagcggagatatactgccttgctttctctcctactgtg
cagtggctagcggtctcgagtgacaaaggaactgttcatgtctttagcctcaaggctgat
tcagtagttttgggggatgataggtcaactagtgcattggaatcacctctttctaatcaa
tcagctttatcatccctttctattttgaaaggtgttttgccaaaatatttcagctcagag
tggtcggtggctcaattccggctgcctgaaggtccccggtgcattgttgcttttggacaa
caaaagaacactatcatgattattggcatggatggaagcttccgtcggtgccagtttgac
ccggtgaacggtggacagatgactcaaatggaagaacacaatttcttaaagcaagaagaa
cattttccaagttggaatgaagattcatag
DBGET
integrated database retrieval system
